Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0479 ATGTTGAGTCGTGCACTTTCAACCCCAACAACTCAAAGCCTCAAGGCAACAAGAACAAATGCAATGCTTTATCCAACTCATAGATTATTGTCTCTTAAGAACCCAGTATCAAATACCAGAGGATTTTCATCAAAAGAGAATATTTTTATCAGAGGTCACCAAATCAATATAAAACAATTTTTTGGCCTTATCTCGGGTCGTACGCCACGAAACAAAGCAGGAGTTGTTTCCCCAAGGTGTGGCCTGCCACTGACAGAAGAGAATGTGGAGAAGGTTTTGGATGAGGTAAGGCCTGGCTTGATGGCTGATGGAGGGAATGTGGCATTACATGAGATAGATGGTCTTGTTGTTGTCCTCAAGCTGCAAGGGGCATGTGGATCATGTCCTAGCTCAGCTATGACATTGAAAATGGGAATTGAAACTCGCCTCCGGGATAAGATTCCAGAAATCTTGGAAGTGGAGCAGATAATGGACACCGAGACTGGTCTTGAGTTAACCGAAGAAAATGTTGAAAATGTTCTTTCTGAAATTAGACCATACCTTGTTGGCACCGGGGGAGGAATATTAGAGCTTGTTCAGATCAAGGATTATACTGTCAAAGTTCGGCTAAGTGGACCTGCAGCTGGGGTTACAACAGTTCGTGTTGCCTTAACACAGAAGCTGAGAGATAAGATACCTGCTATTGCAGCTGTGCAGCTAATAGACTGA 708 0.4336 MLSRALSTPTTQSLKATRTNAMLYPTHRLLSLKNPVSNTRGFSSKENIFIRGHQINIKQFFGLISGRTPRNKAGVVSPRCGLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSAMTLKMGIETRLRDKIPEILEVEQIMDTETGLELTEENVENVLSEIRPYLVGTGGGILELVQIKDYTVKVRLSGPAAGVTTVRVALTQKLRDKIPAIAAVQLID* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0479 235 Gene3D - 80 163 IPR034904 -
Gso9g0479 235 Pfam NifU-like domain 89 154 IPR001075 GO:0005506|GO:0016226|GO:0051536
Gso9g0479 235 Pfam NifU-like domain 170 232 IPR001075 GO:0005506|GO:0016226|GO:0051536
Gso9g0479 235 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 86 161 IPR034904 -
Gso9g0479 235 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 164 234 IPR034904 -
Gso9g0479 235 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 14 235 - -
Gso9g0479 235 PANTHER NIFU-LIKE PROTEIN 3, CHLOROPLASTIC 14 235 - -
Gso9g0479 235 Gene3D - 164 235 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0479 Gso-Chr9 5047323 5049644 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0479 - - gmx:100807119 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1339 15 14029855 14031845 Gso9g0479 9 5047323 5049644 GST