Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1339 ATGTTGGGTGGTGCACTTTTAACCCCAACAACTCAAAGCCTCAAGGCAACAAGAACAATTGCAATGCTTTATCCAACTCATAGATTATTGTCTCTTAAGAACCCAGTATCAAATACCAGAGGATTTTCATCAAAAGAGAATATTTTTATCAGAGGTCAACAAATCAACATTAAACAATTTTTTGGCCTTATCTCGGGTCATTCTCCACGAAACAAAGCAGGAGTTGTTTCCCCCAGGTGTGGCCTGCCACTGACAGAAGAGAATGTGGAGAAGGTTTTAGATGAGGTAAGGCCTGGCTTGATGGCTGATGGAGGGAATGTGGCATTACATGAGATAGATGGTCTTGTTGTTGTCCTCAAGCTACAAGGGGCATGTGGATCATGTCCTAGCTCAGCTATGACATTGAAAATGGGAATTGAAACTCGCCTCCGGGATAAGATTCCAGAAATCTTGGAAGTGGAGCAGATAATGGACACTGAGACCGGTCTCGAGTTAACCGAAGAAAATGTTGAAAATGTAGGGGGAACTTCTTGCATCGTTTCTAGCATTTCCATAATTTCATTGGCCTTTTGGAATTTTGATTTTAAGTATGAGGTTCTTTCTGAAATTAGACCATACCTTGTTGGCACTGGGGGAGGAATATTAGAGCTTGTTCAGATAAAGGATTATGTTGTCAAAGTTCGGCTAAGTGGACCTGCAGCTGGGGTTACGACAGTTCGTGTTGCCTTAACACAGAAGCTGAGAGATAAGATACCTGCTATTGCAGCTGTGCAACTAATAGACTGA 786 0.4211 MLGGALLTPTTQSLKATRTIAMLYPTHRLLSLKNPVSNTRGFSSKENIFIRGQQINIKQFFGLISGHSPRNKAGVVSPRCGLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSAMTLKMGIETRLRDKIPEILEVEQIMDTETGLELTEENVENVGGTSCIVSSISIISLAFWNFDFKYEVLSEIRPYLVGTGGGILELVQIKDYVVKVRLSGPAAGVTTVRVALTQKLRDKIPAIAAVQLID* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1339 261 Gene3D - 197 261 IPR034904 -
Gso15g1339 261 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 194 260 IPR034904 -
Gso15g1339 261 Gene3D - 80 172 IPR034904 -
Gso15g1339 261 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 21 261 - -
Gso15g1339 261 PANTHER NIFU-LIKE PROTEIN 3, CHLOROPLASTIC 21 261 - -
Gso15g1339 261 Pfam NifU-like domain 89 154 IPR001075 GO:0005506|GO:0016226|GO:0051536
Gso15g1339 261 Pfam NifU-like domain 198 258 IPR001075 GO:0005506|GO:0016226|GO:0051536
Gso15g1339 261 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 86 160 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1339 Gso-Chr15 14029855 14031845 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1339 - - gsj:114387064 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1339 15 14029855 14031845 Gso9g0479 9 5047323 5049644 GST