Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0438 ATGGAAGAACAAGAAGAGTGCCAAGTTGGGGAAACCAAGGAAACTCCAACTCCTCCTGTTCGAGTCTATGCTGATGGGATTTATGATCTCTTTCACTTCGGCCATGCCCGTTCTCTCGAGCAAGCCAAAAAACTGTTTCCGAACACTTATCTTCTTGTTGGATGCTGCAATGATGAGATCACCCATAAGTATAAGGGCAAAACTGTCATGACTGAGAAGGAACGCTATGAGTCTCTTCGCCACTGCAGGTGGGTTGATGAAGTCATTCCAGATGCGCCATGGGTAATCACTCAGGAGTTCCTTGACAAGCATCAAATTGACTATGTGGCACATGATAGTCTTCCTTATGCTGATGCAAGTGGAGCTGGAAAGGATGTGTATGAATATGTTAAGTCTGTTGGAAAATTTAAGGAAACAAAGCGGACTGATGGAATTTCTACTTCTGATATCATAATGAGAATTATCAAAGATTATAATCAATATGTAATGCGTAATTTGGACCGTGGTTATACAAGAAAGGAGCTAGGTGTTAGCTATGTCAAGGAGAAGAGGTTGAGAATGAACATGGGACTTAAAAAATTGCAGGAGAGAGTGAAGAAACAACAAGAGGAAGTAGGAAAGAAGATTCAAACGGTGGGAAAAATCGCTGGAATGCACCCTAATGAATGGGTTGAAAACGCTGATCGGTTGGTTGCTGGATTTCTTGAGATGTTTGAAGAAGGTTGCCACAAAATGGGAACAGCAATCAGGGACAGAATACAGGAACGATTAAGGGCACAGCAGCTGAAATCTCTTCTTTATGATGAGTGGGATGATGATAATGAATTCTATGATGATGATGAATACTACACAGACTAA 858 0.4138 MEEQEECQVGETKETPTPPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDEITHKYKGKTVMTEKERYESLRHCRWVDEVIPDAPWVITQEFLDKHQIDYVAHDSLPYADASGAGKDVYEYVKSVGKFKETKRTDGISTSDIIMRIIKDYNQYVMRNLDRGYTRKELGVSYVKEKRLRMNMGLKKLQERVKKQQEEVGKKIQTVGKIAGMHPNEWVENADRLVAGFLEMFEEGCHKMGTAIRDRIQERLRAQQLKSLLYDEWDDDNEFYDDDEYYTD* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0438 285 SUPERFAMILY Nucleotidylyl transferase 21 153 - -
Gso9g0438 285 Pfam Cytidylyltransferase-like 23 152 IPR004821 GO:0003824|GO:0009058
Gso9g0438 285 PANTHER CYTIDYLYLTRANSFERASE 1 281 IPR045049 GO:0004105|GO:0006657
Gso9g0438 285 PANTHER CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE 2-LIKE ISOFORM X1 1 281 - -
Gso9g0438 285 Coils Coil 184 211 - -
Gso9g0438 285 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 21 88 IPR004821 GO:0003824|GO:0009058
Gso9g0438 285 CDD CCT 19 169 IPR041723 -
Gso9g0438 285 Gene3D HUPs 1 240 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0438 Gso-Chr9 4388592 4397617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0438 46 283 Acyl Lipid Metabolism Gene Families AT2G32260 77.824 1.63e-133 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0438 K00968 - gmx:100786249 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1294 15 13301719 13307052 Gso9g0438 9 4388592 4397617 GST