Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1294 ATGGAAGAACAAGAGTGCCAAGTTGTGGAAAATAAGGAAACTCCAACTCCTCCTGTTCGAGTCTATGCTGATGGGATTTATGATCTCTTTCACTTCGGCCATGCCCGTTCTCTCGAGCAAGCCAAAAAACTGTTTCCAAACACTTATCTCCTTGTTGGATGCTGCAATGATGAGATCACACATAAGTATAAAGGCAAAACTGTCATGACTGAGAAGGAACGCTATGAGTCTCTTCGCCACTGCAGGTGGGTTGATGAAGTTATTCCAGATGCGCCATGGGTAATCTCTCGGGAGTTCCTTGACAAGCATCAAATTGACTATGTGGCACATGATAGTCTTCCTTATGCTGATGCAAGTGGAGCTGGAAAGGATGTGTATGAATATGTTAAGTCTGTTGGAAAATTTAAGGAAACAAAGCGAACTGATGGAATTTCTACATCTGATATCATTATGAGAATTATCAAAGATTATAATCAATATGTAATGCGTAATTTGGACCGTGGTTATACAAGAAAGGAGCTAGGTGTCAGCTATGTCAAGGAAAAGAGGTTGAGAATGAACATGGGACTTAAAAAATTGCAGGAGAGAGTGAAGAAACAACAAGAGAAAGTAGGAAAGAAGATTCAAACAGTGGGAAAAATCGCTGGAATGCACCCTAATGAATGGGTCGAAAACGCTGATCGGTTGGTTGCTGGATTTCTCGAGATGTTTGAAGAAGGTTGCCACAAAATGGGAACAGCAATCAGAGACAGAATACAGGAACAATTAAAGGCACAGCAGCTGAAATCTCTTCTTTATGATGAGTGGGATGATGATGAATTCTATGATGATGATGATGAATACTACACAGACTAA 855 0.4047 MEEQECQVVENKETPTPPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDEITHKYKGKTVMTEKERYESLRHCRWVDEVIPDAPWVISREFLDKHQIDYVAHDSLPYADASGAGKDVYEYVKSVGKFKETKRTDGISTSDIIMRIIKDYNQYVMRNLDRGYTRKELGVSYVKEKRLRMNMGLKKLQERVKKQQEKVGKKIQTVGKIAGMHPNEWVENADRLVAGFLEMFEEGCHKMGTAIRDRIQEQLKAQQLKSLLYDEWDDDEFYDDDDEYYTD* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1294 284 Coils Coil 183 210 - -
Gso15g1294 284 Pfam Cytidylyltransferase-like 22 151 IPR004821 GO:0003824|GO:0009058
Gso15g1294 284 CDD CCT 18 168 IPR041723 -
Gso15g1294 284 PANTHER CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE 2-LIKE ISOFORM X1 2 282 - -
Gso15g1294 284 SUPERFAMILY Nucleotidylyl transferase 20 152 - -
Gso15g1294 284 Gene3D HUPs 1 239 IPR014729 -
Gso15g1294 284 PANTHER CYTIDYLYLTRANSFERASE 2 282 IPR045049 GO:0004105|GO:0006657
Gso15g1294 284 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 20 87 IPR004821 GO:0003824|GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1294 Gso-Chr15 13301719 13307052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1294 45 282 Acyl Lipid Metabolism Gene Families AT2G32260 76.987 1.15e-132 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1294 K00968 - gmx:100791886 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1294 15 13301719 13307052 Gso9g0438 9 4388592 4397617 GST