Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0425 ATGAAAGCTTTCGTGGCTGTGGCTCTGTTTGCGTTGTTGTTGGTGTTTGTTGATGCGAGGTTTGTGGTGGAGAAGAGCAGTATAACTGTTCTGTCACCTCATAAGCTGAGGGCGAAGCGCGATGGCGCCATCGGAAACTTCGGTCTTCCGGACTACGGAGGATTCATCGTTGGCTCTGTGCTGTATCCCACCAAAGGCTCCCACGGGTGTCAGGTCTTCGAGGGCGATAAGCCCTTCAAAATTCACTCTTATCGTCCCACTATTGTTCTCCTTGATCGTGGAGAGTGTTACTTTGCCTTGAAGGTTTGGCATGCCGAACAGGCTGGTGCTGCGGCAGTTTTGGTGACTGACAGCATTGAGGAGTCTCTGATAACCATGGATTCTCCTGAGGAGAGCTCTGATGCAGATGGCTACATAGAGAAGATCACGATTCCATCGGCTCTGATAGAGAAATCCTTTGGTGATTCGTTGAAAGATGCTTTGAATAACAAGGATGAAGTTTTGCTAAGAATTGACTGGAGAGAGTCAGTACCTCACCCTGACAACAGGGTTGAGTATGAGCTCTGGACCAACAGCAATGATGAATGTGGAGCTCGTTGCGATGAACAGATGAATTTCGTGAAGAATTTTAAGGGTCATGCTCAGATTCTTGAGAGGGGCGGTTATACTTTGTTCACTCCACACTACATAACTTGGTTTTGTCCACCACCCTTCATTCTTAGCAGTCAGTGCAAGTCTCAATGTATAAACCATGGGAGATATTGTGCTCCAGATCCGGAGAAGGATTTTGGAGAGGGATATGAAGGGAAGGATGTGGTGTATGAAAATTTGAGGCAGCTTTGTGTTCATAGAGTTGCCAATGAGAGCAACCGTTCTTGGGTTTGGTGGGATTATGTGACAGATTTCCATGTCAGATGTTCTATGAAGGAGAAAAGATATAGCAAAGATTGTGCTGAGGAAGTCATGAAATCATTAGATCTGCCTGTGGATAAAATTAAGAAATGCATGGGTGATCCTGAAGCGGATGTGGAGAATGAAGTGCTAAAGAATGAGCAACAAGTCCAGATTGGTAGAGGATCCCGCGGTGATGTCACCATCTTGCCAACATTGGTTATAAACAACGTACAGTATAGAGGAAAATTGGAGAGAACTGCTGTACTCAAGGCTGTATGTTCCGGATTTAAGGAGACTACTGAACCTTCAGTTTGTTTAAGTGGAGATGTCGAGACTAATGAGTGTCTTGAAAGAAATGGAGGATGTTGGCAAGACAAACATGCTAACATAACTGCTTGCAAGGATACTTTCAGGGGAAGAGTTTGTGAGTGCCCTGTTGTGAACGGTGTCCAGTATAAGGGTGATGGTTATACTACATGTGAAGCTTTTGGACCTGCAAGGTGTTCTATAAACAATGGTGGTTGTTGGTCAGAAACTAAAAAAGGACTAACTTTCTCAGCTTGCTCAGACTCCAAGGTAAATGGCTGTCAGTGCCCAGTTGGGTTTCGTGGGGATGGTACTAATAAATGCGAAGACGTTGATGAATGTAAGGAACGAAGTGCTTGTCAGTGTGATGGCTGCAGCTGCAAGAATACTTGGGGTAGTTACGATTGTAAATGCAAGGGGAACCTCCTATATATAAAGGAACAAGATGCTTGTATCGAAAGAAGTGAATCAAAATTTGGACGGTTCCTTGCCTTTGTGGTCATAGCAGTTGTTGTTGGTGCTGGTCTAGCTGGTTACGTGTTCTACAAATATAGGCTCCGGTCATACATGGACTCTGAGATCATGGCTATCATGTCACAATACATGCCATTGGACCAGCAAAATAATGTAGTTCATGCTGAAACTCAACCTTTACGACAACAAGGCACCGTGTAA 1875 0.4459 MKAFVAVALFALLLVFVDARFVVEKSSITVLSPHKLRAKRDGAIGNFGLPDYGGFIVGSVLYPTKGSHGCQVFEGDKPFKIHSYRPTIVLLDRGECYFALKVWHAEQAGAAAVLVTDSIEESLITMDSPEESSDADGYIEKITIPSALIEKSFGDSLKDALNNKDEVLLRIDWRESVPHPDNRVEYELWTNSNDECGARCDEQMNFVKNFKGHAQILERGGYTLFTPHYITWFCPPPFILSSQCKSQCINHGRYCAPDPEKDFGEGYEGKDVVYENLRQLCVHRVANESNRSWVWWDYVTDFHVRCSMKEKRYSKDCAEEVMKSLDLPVDKIKKCMGDPEADVENEVLKNEQQVQIGRGSRGDVTILPTLVINNVQYRGKLERTAVLKAVCSGFKETTEPSVCLSGDVETNECLERNGGCWQDKHANITACKDTFRGRVCECPVVNGVQYKGDGYTTCEAFGPARCSINNGGCWSETKKGLTFSACSDSKVNGCQCPVGFRGDGTNKCEDVDECKERSACQCDGCSCKNTWGSYDCKCKGNLLYIKEQDACIERSESKFGRFLAFVVIAVVVGAGLAGYVFYKYRLRSYMDSEIMAIMSQYMPLDQQNNVVHAETQPLRQQGTV* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0425 624 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 12 600 - -
Gso9g0425 624 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN-CONTAINING PROTEIN-RELATED 12 600 - -
Gso9g0425 624 SUPERFAMILY PA domain 87 123 IPR046450 -
Gso9g0425 624 Pfam PA domain 58 157 IPR003137 -
Gso9g0425 624 Gene3D Laminin 403 459 - -
Gso9g0425 624 Gene3D - 18 180 - -
Gso9g0425 624 Gene3D Laminin 464 546 - -
Gso9g0425 624 ProSitePatterns Calcium-binding EGF-like domain signature. 510 536 IPR018097 GO:0005509
Gso9g0425 624 SMART egfca_6 510 552 IPR001881 GO:0005509
Gso9g0425 624 CDD EGF_CA 510 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0425 Gso-Chr9 4241098 4247446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0425 5 621 Miscellaneous Gene Families AT1G30900 70.968 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0425 - - gmx:100800382 1280.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1286 15 13198381 13204692 Gso9g0425 9 4241098 4247446 GST