Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1286 ATGAAACCTTTCGTGGCTGCGGCTGTTTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTTGTTGATGCCAGGTTTGTGGTGGAGAAGAGCAGTATAACTGTTCTGTCCCCGCATAAGCTGAAGGCGAAGCGCGATGGCGCCATCGGTAACTTCGGTCTTCCGGACTACGGAGGATTCATCGTTGGCTCTGTGGTGTATCCCGCTAAAGGCTCACACGGATGTGAGAACTTCGAGGGCGATAAGCCCTTCAAAATTCAGTCTTATCGTCCCACTATTGTTCTCCTTGATCGTGGAGAGTGTTACTTTGCCTTGAAGGTTTGGCACGCCCAACTGGCCGGAGCTGCGGCAGTTTTGGTGACAGACAGCATTGAGGAGTCTCTGATAACCATGGATTCTCCTGAGGAGAGCTCTGATGCAGATGGCTACATAGAGAAGATCACAATTCCATCGGCTCTGATAGAGAAATCCTTTGGTGATACGCTGAAAGACGCTTTGAATAACAAAGATGAAGTTTTGCTAAGAATTGATTGGAGAGAGTCAGTACCTCACCCTGACAGCAGGGTTGAGTATGAGTTCTGGACCAACAGCAATGACGAATGTGGAGCTCGTTGCGACGAACAGATGAATTTTGTGAAGAATTTTAAGGGTCATGCTCAGATTCTTGAGAGGGGTGGTTACACCTTGTTCACTCCACACTACATAACATGGTTTTGTCCACCACCCTTCATTCTTAGCAGTCAGTGCAAGTCTCAATGTATAAACCGTGGGAGATATTGTGCTCCGGATCCGGAGAAGGATTTTGGAGAAGGATATGAAGGGAAGGATGTGGTGTATGAAAATTTGAGGCAGTTGTGTGTTCATAGAGTTGCCAATGAGAGCAACCGTTCATGGGTCTGGTGGGATTATGTGACAGATTTCCATGTCAGATGTTCTATGAAGGAGAAAAGATACAGCAAGGATTGTGCTGAGGAAGTCATGAAATCATTAGATCTGCCTATGGATAAAATTAAGAAATGCATGGGTGATCCTGAAGCAGATGTGGAGAATGAAGTGCTAAAGAATGAGCAACAAGTCCAGATCGGTAGAGGATCTCGCGGTGATGTCACCATCTTGCCAACGTTGGTTATAAACAATGTCCAGTATAGAGGAAAATTGGAGAGAACTGCTGTACTCAAGGCTGTATGTTCTGGATTTAAGGAGACTACTGAACCTTCAGTTTGTTTAAGTGGAGATGTTGAGACTAATGAGTGTCTTGAAAGAAATGGAGGATGTTGGCAAGACAAACATGCTAACATAACTGCTTGCAAGGATACTTTCAGGGGAAGAGTTTGCGAGTGCCCTGTTGTGAACGGTGTTCAGTATAAGGGTGATGGTTATACAACATGTGAAGCTTTTGGACCTGCAAGGTGTTCTATAAACAATGGTGGTTGTTGGTCTGAAACTAAAAAGGGACTAACTTTCTCAGCTTGCTCAGACTCCAAGGTAAATGGCTGTCAGTGCCCGGTTGGGTTTCGTGGGGATGGCACTAATAAATGCGAAGACGTTGATGAATGTAAGGAACGAAGTGCTTGTCAGTGTGATGGCTGCAGCTGCAAGAACACTTGGGGTAGTTACGATTGTAAATGCAAGGGAAATCTTCTATATATAAAGGAGCAAGATGTTTGTATTGAAAGAAGTGGATCAAAATTTGGACGGTTCCTTGCCTTTGTGGTCATAGCAGTTGTTGTTGGTGCTGGTCTAGCCGGTTACGTGTTCTACAAATATAGGCTCCGGTCTTACATGGACTCTGAGATCATGGCTATCATGTCACAATACATGCCACTGGACCAGCAAAATAATGTAGTTCATGCTGAAGCTCAGCCTTTACGACAACAAGGCGCCGTGTAA 1887 0.4515 MKPFVAAAVLLLLLVVVVVVVDARFVVEKSSITVLSPHKLKAKRDGAIGNFGLPDYGGFIVGSVVYPAKGSHGCENFEGDKPFKIQSYRPTIVLLDRGECYFALKVWHAQLAGAAAVLVTDSIEESLITMDSPEESSDADGYIEKITIPSALIEKSFGDTLKDALNNKDEVLLRIDWRESVPHPDSRVEYEFWTNSNDECGARCDEQMNFVKNFKGHAQILERGGYTLFTPHYITWFCPPPFILSSQCKSQCINRGRYCAPDPEKDFGEGYEGKDVVYENLRQLCVHRVANESNRSWVWWDYVTDFHVRCSMKEKRYSKDCAEEVMKSLDLPMDKIKKCMGDPEADVENEVLKNEQQVQIGRGSRGDVTILPTLVINNVQYRGKLERTAVLKAVCSGFKETTEPSVCLSGDVETNECLERNGGCWQDKHANITACKDTFRGRVCECPVVNGVQYKGDGYTTCEAFGPARCSINNGGCWSETKKGLTFSACSDSKVNGCQCPVGFRGDGTNKCEDVDECKERSACQCDGCSCKNTWGSYDCKCKGNLLYIKEQDVCIERSGSKFGRFLAFVVIAVVVGAGLAGYVFYKYRLRSYMDSEIMAIMSQYMPLDQQNNVVHAEAQPLRQQGAV* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1286 628 SUPERFAMILY PA domain 87 168 IPR046450 -
Gso15g1286 628 Gene3D Laminin 468 550 - -
Gso15g1286 628 Pfam PA domain 62 161 IPR003137 -
Gso15g1286 628 SMART egfca_6 514 556 IPR001881 GO:0005509
Gso15g1286 628 Gene3D Laminin 407 463 - -
Gso15g1286 628 Gene3D - 22 184 - -
Gso15g1286 628 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 9 604 - -
Gso15g1286 628 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN-CONTAINING PROTEIN-RELATED 9 604 - -
Gso15g1286 628 ProSitePatterns Calcium-binding EGF-like domain signature. 514 540 IPR018097 GO:0005509
Gso15g1286 628 CDD EGF_CA 514 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1286 Gso-Chr15 13198381 13204692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1286 6 625 Miscellaneous Gene Families AT1G30900 71.452 0.0 973
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1286 - - gmx:100790467 1277.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1286 15 13198381 13204692 Gso9g0425 9 4241098 4247446 GST