Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0424 ATGGCACCATCATCAACGTTAACCCTATCCAAAGTTTCTTTGTTCCTTGTGTTGCTCTTCTTTGTTTCACTTTCTTCTTCCTATGCAACTTCTCGCCTCACCCATGACCGTGTCAATAACCCACCAAAATCACGAGCAGAAAAGCTCATAAGAAGCCTTAACCTATCTCCAAAGGACCCAGTAAACATTGTTAAAGGTGATGACCTTGCTAATGGTTTTGTCCCAGGGAATATCGTGGAGAAGAAGTTCTCGTTTCTTGGTGATTCTGGACCTTCTATTGAAGACCTTGGTCATCATGCAGGTTACTATTCACTTCCTAATTCCAAAGCTGCAAGGATGTTCTACTTTTTCTTTGAATCACGGAGCAACAAGGATGATCCAGTTGTCATATGGTTGACTGGAGGACCAGGGTGTGGAGGTGAATTGGCCTTGTTTTATGAAAATGGCCCTTTTCACATCGCCAACAACTTGTCCCTTGTATGGAATGATTTCGGTTGGGACCAGGCATCAAATATTTTATTTGTTGACCAACCTACCGGGACAGGTTTTAGTTACTCTTCTGATGCTAGTGACATTCGTAATGATGAAGTAGGCATTAGCAATGATTTATATGATTTCTTGCAGGAGTTTTTCAAGGCGCATCCTGAATTTGTTAAGAATGACTTTTACATTACCGGAGAATCATATGCTGGACACTATGTTCCAGCTCTTGCATCCCGGGTTAACCAAGGAAATAAAGAAAATGAAGGAATTCATATCAACCTCAAGGGTTTTGCAATTGGTAATGGGTTAACAAATCCTGCAATTCAGTACCAAGCATACCCAGATTTTGCATTAGACAACGGAATAATTACAAAGGCTGAACACGACCAAATCAGCCAGTCGATCCCTGATTGTGAACAAGCTGCTAAAACTTGCGAAACTCAAGGTGGGCAAAGTTGTGAGACTGCATTTAATATTTGTGATAGCATATTCAATAGTATCATGACCATTGCTGGTGACATTAATTACTATGACATCAGAAAGAAATGTGTAGGAGAATTGTGCTATGACTTGAAGGACGTGGAGACGTTGTTAAACCTGCAGAATGTGAAGAGTGCTTTAGGTGTGGCGGAAGATTTGACGTATGTTTCATGCAGTACAACAGTGTATAATGCTATGGGGCAAGATTGGATGAAAAACTTGGAAGTGGGGATTCCTTCTCTTCTTGAGGATGGAATCAAGTTGCTTGTGTATGCAGGGGAAGAAGATCTCATATGCAATTGGCTTGGGAATTCAAGGTGGGTTTATGCCATGGAGTGGTCAGGCCAAAAGGCATTTGGAACATCTCCTACAGTGAAATTTGTTGTTGATGGTGCAGAAGCAGGGTCTCTGAATAGCTATGGACCTCTTTCTTTCCTTAAGGTATATGAAGCTGGGCACTTGGTTCCTATGGATCAACCAAAAGCTGCACTTCAGATGTTCAAAAGCTGGATGGGAGGGAATTTGATCTAA 1494 0.415 MAPSSTLTLSKVSLFLVLLFFVSLSSSYATSRLTHDRVNNPPKSRAEKLIRSLNLSPKDPVNIVKGDDLANGFVPGNIVEKKFSFLGDSGPSIEDLGHHAGYYSLPNSKAARMFYFFFESRSNKDDPVVIWLTGGPGCGGELALFYENGPFHIANNLSLVWNDFGWDQASNILFVDQPTGTGFSYSSDASDIRNDEVGISNDLYDFLQEFFKAHPEFVKNDFYITGESYAGHYVPALASRVNQGNKENEGIHINLKGFAIGNGLTNPAIQYQAYPDFALDNGIITKAEHDQISQSIPDCEQAAKTCETQGGQSCETAFNICDSIFNSIMTIAGDINYYDIRKKCVGELCYDLKDVETLLNLQNVKSALGVAEDLTYVSCSTTVYNAMGQDWMKNLEVGIPSLLEDGIKLLVYAGEEDLICNWLGNSRWVYAMEWSGQKAFGTSPTVKFVVDGAEAGSLNSYGPLSFLKVYEAGHLVPMDQPKAALQMFKSWMGGNLI* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0424 497 ProSitePatterns Serine carboxypeptidases, serine active site. 224 231 IPR018202 GO:0004185
Gso9g0424 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 174 IPR001563 GO:0004185|GO:0006508
Gso9g0424 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 185 IPR001563 GO:0004185|GO:0006508
Gso9g0424 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 210 235 IPR001563 GO:0004185|GO:0006508
Gso9g0424 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 464 477 IPR001563 GO:0004185|GO:0006508
Gso9g0424 497 SUPERFAMILY alpha/beta-Hydrolases 97 494 IPR029058 -
Gso9g0424 497 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 38 494 - -
Gso9g0424 497 Pfam Serine carboxypeptidase 96 493 IPR001563 GO:0004185|GO:0006508
Gso9g0424 497 Gene3D alpha/beta hydrolase 81 496 IPR029058 -
Gso9g0424 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 494 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0424 Gso-Chr9 4229725 4233348 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0424 K16298 - gmx:100798795 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1285 15 13177915 13182785 Gso9g0424 9 4229725 4233348 GST