Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1285 ATGGCACCATCATCAACGTTAACACTCTCCAAAGTCTCTTTGTTGCTCTTCTTTTTGTCACTTTCTTCTTCCTATGCAACTTCTCGCCTCAGCCATGACCATGTCAACCCACCAAAATCACGAGCAGAAAAGCTCATTAGAAGCCTTAACCTATTTCCAAAGAACCCAATAAACATTGTTAAAGGTGATGGCCTTGCTAATGCTTTTGTCTCAGGGAATATCGTGGAGAAGAAGTTCTCGTTTCTTGGTGATTCTGGACCTTCAATTGAAGACCTTGGTCACCATGCAGGTTACTTTTCACTTCCTAATTCCAAAGCTGCAAGGATGTTCTACTTTTTCTTTGAATCACGAAATAACAAGGATGATCCAGTTGTCATATGGTTGACTGGAGGACCAGGGTGTGGTGGTGAATTGGCTTTGTTTTACGAAAATGGCCCTTTTCATATTGGCAACAACTTGTCTCTTATATGGAATGATTATGGTTGGGACCAGGCATCAAATATTTTATTTGTTGACCAACCTACGGGGACAGGTTTTAGTTACTCTTTTGATGCTAGTGACATTCGTCATGATGAAGCATGCATTAGCAATGATTTATATGACTTCTTGCAGGAGTTTTTCAAGGCACATCCTCAATTCGTTAAGAATGACTTTTATATCACTGGAGAATCATACGCTGGACATTATGCTCCAGCTCTTGCATCCCGTGTTAACCAAGGAAACAAAGAAAATCAAGGAATTCATATCAACCTCAAGGGTTTTGCAATTGGTAATGGTTTAACAAATCCTGCAATTCAGTACCCAGCATACCCAGATTATGCATTAGAGAACGGAGTAATTACAAAGGCTGAACACGATCAAATCAGCAAGTCAATCCCAGATTGTGAACAAGCTGCTAAAACTTGCGATAATAAAGGTGGACAGAGTTGTGAGATTGCATTTAATATTTGTGATGGCATATTCAATAGTATCATGTCCATTGCTGGTGACATTAATTACTATGACATCAGAAAAAAATGTGTGGGAGAATTGTGCTATGACTTCAAGAGCGTGGACACGTTGTTAAACCTGCAGAAAGTGAAGAGTGCTTTAGGTGTGGCGGCAGACTTGCAGTTTGTTTCATGCAGTTCAACCGTGTATGATGCTATGGCGCAAGATTTGATGAAAAACTTGGATGTGGGGATTCCTGCACTTCTTGAGGATGGAATCAAGTTGCTTGTGTATGCAGGGGAAGAAGATCTCAGATGCAATTGGCTTGGGAATTCAAGGTGGGTTTATGCCATGGAGTGGTCAGGCCAAAAGGCCTTTGGAACATCTCCTACCGTGAAATTTGTTGTTGATGGCGCAGAAGCAGGGTCTCTGAATAGCTATGGACCTCTCTCTTTCCTTAAGGTATATGAGGCTGGACACCTTGTCCCTATGGATCAACCAAAAGCTGCACTTCAGATGTTGAAAAACTGGATGGGAGGGAGTTTGACCTAA 1482 0.4143 MAPSSTLTLSKVSLLLFFLSLSSSYATSRLSHDHVNPPKSRAEKLIRSLNLFPKNPINIVKGDGLANAFVSGNIVEKKFSFLGDSGPSIEDLGHHAGYFSLPNSKAARMFYFFFESRNNKDDPVVIWLTGGPGCGGELALFYENGPFHIGNNLSLIWNDYGWDQASNILFVDQPTGTGFSYSFDASDIRHDEACISNDLYDFLQEFFKAHPQFVKNDFYITGESYAGHYAPALASRVNQGNKENQGIHINLKGFAIGNGLTNPAIQYPAYPDYALENGVITKAEHDQISKSIPDCEQAAKTCDNKGGQSCEIAFNICDGIFNSIMSIAGDINYYDIRKKCVGELCYDFKSVDTLLNLQKVKSALGVAADLQFVSCSSTVYDAMAQDLMKNLDVGIPALLEDGIKLLVYAGEEDLRCNWLGNSRWVYAMEWSGQKAFGTSPTVKFVVDGAEAGSLNSYGPLSFLKVYEAGHLVPMDQPKAALQMLKNWMGGSLT* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1285 493 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 490 IPR001563 GO:0004185|GO:0006508
Gso15g1285 493 Pfam Serine carboxypeptidase 92 489 IPR001563 GO:0004185|GO:0006508
Gso15g1285 493 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 34 490 - -
Gso15g1285 493 SUPERFAMILY alpha/beta-Hydrolases 93 490 IPR029058 -
Gso15g1285 493 Gene3D alpha/beta hydrolase 76 492 IPR029058 -
Gso15g1285 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 170 IPR001563 GO:0004185|GO:0006508
Gso15g1285 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 181 IPR001563 GO:0004185|GO:0006508
Gso15g1285 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 206 231 IPR001563 GO:0004185|GO:0006508
Gso15g1285 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 460 473 IPR001563 GO:0004185|GO:0006508
Gso15g1285 493 ProSitePatterns Serine carboxypeptidases, serine active site. 220 227 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1285 Gso-Chr15 13177915 13182785 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1285 K16298 - gmx:100789937 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1285 15 13177915 13182785 Gso9g0424 9 4229725 4233348 GST