Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0413 ATGCCTTCTCCATCTCGTTATGGCTTCGGGATTTCCCAAATTACCCTCAGACTGATGATGCTCTTGTTTTTATTTTTCGCACGCGCGGCTTCGGGTCTGAACCTCACCGCCCTCCTCTCCACCGTGCCGGAGCTCTCCCAATTCACCTCCCTCCTCGCCTCCGCCACGCCCCTCGCTGCGGATCTCTCGGACCGCTCCTCCCTCTCCATTCTCGCCGTCCCCAACGCCTACCTCGCCGCCGACGACCACCTCTCCCGCCACCACCTCTCCCCGGCCGCCCTCGCCGACGTCCTTCGCTACCACGTCCTCCTCCAGTTCCTCTCCTGGTCCGACCTCCGCGCCCTCCCCCCCTCCGGCAAGCTCATCACCACGCTCCTCCAAACCACCGGCCGCGCCACCGACAACTTCGGCTCTGTGAACCTCACCCGCGACTCTCAATCTGGCGTCATCTCGATCCGCTCCCCCGCACCGTACTCCCCCTCCAACGCCACCATCCTCTCCCTCGTCAAAACCCTACCCTACAATGTCACCATCTTCGCCGTCAATTCCCTCCTCATCCCCTACGGCCTCGACCTCATGGCTTCCGAAACTCGCCCCATGGTCCTCAACATCACCAGTGCCCTCGTCAACGGCCACAACTTCAACGTTGCCGCCTCCATGCTCGCTGCTTCCGGCGTCGAACAGGAATTTGAAGCGGACGAGGGTGGTGCCGGAATCACGCTCTTTGTCCCCGTCGACGACGCATTCGCGGATCTCCCTCCCTCTGTTGCTCTTCAGTCTCTTCCCGCGGATAAGAAAGCCGTTGTTCTCAAATTCCACGTGCTCCATTCGTATTACCCTCTTGGTTCTCTTGAATCAGTTGTTAACCCCTTTCAACCTACCCTTGCTACTGAGGCCATGGGTGCTGGCAGCTTCACGCTCAACATTTCCCGCGTGAACGGCTCTGTCGCCATCAACACCGGCATCGTTCAGGCCTCAATTACGCAGACCGTGTTTGATCAGAACCCTGTTGCCATTTTCGGGGTTTCCAAGGTTCTCTTGCCTAGGGAAATTTTTGGGAAAAATCCGACTGTGTCCACCAAGCCTCTTGATAATGCTCCTCCACCGGATGATGATGCTTTGTCACCGGAGAATTCACCGGGATTTGATGGACAGCCCTCACACCTATCTTCGCCACCGGGATTTCGTGAAGATGTGAGGTCTCATGCTGGTGGTGCTGGTGGTTCCTTGAACTTTGTTGTTCTTCTTTGCTGTATAGGATTGTATTTTGTGGTATAG 1278 0.5736 MPSPSRYGFGISQITLRLMMLLFLFFARAASGLNLTALLSTVPELSQFTSLLASATPLAADLSDRSSLSILAVPNAYLAADDHLSRHHLSPAALADVLRYHVLLQFLSWSDLRALPPSGKLITTLLQTTGRATDNFGSVNLTRDSQSGVISIRSPAPYSPSNATILSLVKTLPYNVTIFAVNSLLIPYGLDLMASETRPMVLNITSALVNGHNFNVAASMLAASGVEQEFEADEGGAGITLFVPVDDAFADLPPSVALQSLPADKKAVVLKFHVLHSYYPLGSLESVVNPFQPTLATEAMGAGSFTLNISRVNGSVAINTGIVQASITQTVFDQNPVAIFGVSKVLLPREIFGKNPTVSTKPLDNAPPPDDDALSPENSPGFDGQPSHLSSPPGFREDVRSHAGGAGGSLNFVVLLCCIGLYFVV* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0413 425 MobiDBLite consensus disorder prediction 357 400 - -
Gso9g0413 425 SUPERFAMILY FAS1 domain 33 188 IPR036378 -
Gso9g0413 425 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 423 IPR033254 -
Gso9g0413 425 SMART fasc_3 240 349 IPR000782 -
Gso9g0413 425 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 14 423 - -
Gso9g0413 425 Gene3D FAS1 domain 202 349 IPR036378 -
Gso9g0413 425 ProSiteProfiles FAS1/BIgH3 domain profile. 32 185 IPR000782 -
Gso9g0413 425 Gene3D FAS1 domain 27 187 IPR036378 -
Gso9g0413 425 ProSiteProfiles FAS1/BIgH3 domain profile. 201 346 IPR000782 -
Gso9g0413 425 SUPERFAMILY FAS1 domain 208 348 IPR036378 -
Gso9g0413 425 Pfam Fasciclin domain 213 348 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0413 Gso-Chr9 4091534 4093247 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0413 - - gmx:100788356 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1279 15 13060336 13062514 Gso9g0413 9 4091534 4093247 GST