Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1279 ATGCGTTCTCCATCTCGTTATGGATTCGGGATTTCCCAAATTACCCTCAGACTGATCATGCTGTTCTTTTTATTTTTCGCACGCGCGGCATCGGGTCTGAACCTCACCTCCCTGCTCTCCTCCGTGCCGGAGCTCTCCCAATTCACCTCCCTCCTCGCCTCCGCCACTCCCCTCGCCGCGGATCTCTCCGACCGATCCTCCCTCTCCCTCCTCGCCGTCCCCAACGCCTACCTCGCCTCCGACGACCACCTCTCCCGCCACCACCTCTCCCCCGCCGCCCTCGCCGACGTCCTCCGCTACCACGTCCTCCTCCAGTTCCTCTCCTGGTCCGACCTCCGCGCCCTCCCCCCCTCCGGCAAGCTCGTCACCACGCTCCTCCAAACCACCGGCCGCGCCACCGACAACTTCGGCTCCGTCAACCTCACCCGCGACCCCCAATCCGGCGTCATCTCGATCCGCTCCCCCGCCCCCTACTCCCCCTCCAACGCCACCATCCTCTCCCTCATCAAAACCCTACCCTACAACGTCACCATCTTCGCCGTCAATTCCCTCCTCATCCCCTACGGCCTCGACCTCATGGCCTCGGAAACCCGCCCCAACATTGTTCTCAACATCACCAATGCCCTCGTCAACGGCCACAACTTCAACGTCGCCGCCTCCATGCTCGCTGCGTCCGGCGTCGTCCAGGAGTTTGAAGCGGACGAGGGTGGTGCCGGAATAACGCTCTTTGTCCCGGTGGACGACGCATTCGCGGATCTCCCACCCTCGGTTGCTCTCCAGTCTCTGCCTGCGGATAAGAAAGCCGTTGTTCTCAAATTCCACGTGCTACATTCGTATTACCCTCTCGGTTCTCTTGAATCCGTGGTTAACCCTTTCCAACCAACCCTGGCTACTGAGGCCATGGGTGCTGGCAGCTTCACGCTCAACATTTCACGCGTTAACGGCTCCGTCGCAATCAACACCGGCATCGTTCAGGCCTCCATTACGCAGACCGTGTTCGATCAGAATCCCGTCGCAATTTTTGGGGTTTCCAAGGTTCTCTTGCCGAGGGAGATTTTCGGGAGAAATCCGATAGTTTCTGCTAAGCCCCTTGATAATGCTCCTCCACCGGATGATGACGCTTTGTCACCGGAGAATTCACCGGGATTTGATGGACAGCCCTCACACCTATCGTCCCCGCCAGGCTTTCGCGAAGATGTGAGGTCTCATGCTGGTGGTTCTGGTGGTTCCTTGAACTTTGTTGTTCTTCTTTGCTGTATAGGCTTGTATTTTGTGGTATAG 1281 0.5863 MRSPSRYGFGISQITLRLIMLFFLFFARAASGLNLTSLLSSVPELSQFTSLLASATPLAADLSDRSSLSLLAVPNAYLASDDHLSRHHLSPAALADVLRYHVLLQFLSWSDLRALPPSGKLVTTLLQTTGRATDNFGSVNLTRDPQSGVISIRSPAPYSPSNATILSLIKTLPYNVTIFAVNSLLIPYGLDLMASETRPNIVLNITNALVNGHNFNVAASMLAASGVVQEFEADEGGAGITLFVPVDDAFADLPPSVALQSLPADKKAVVLKFHVLHSYYPLGSLESVVNPFQPTLATEAMGAGSFTLNISRVNGSVAINTGIVQASITQTVFDQNPVAIFGVSKVLLPREIFGRNPIVSAKPLDNAPPPDDDALSPENSPGFDGQPSHLSSPPGFREDVRSHAGGSGGSLNFVVLLCCIGLYFVV* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1279 426 SMART fasc_3 241 350 IPR000782 -
Gso15g1279 426 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 14 424 - -
Gso15g1279 426 MobiDBLite consensus disorder prediction 359 402 - -
Gso15g1279 426 Pfam Fasciclin domain 214 349 IPR000782 -
Gso15g1279 426 Gene3D FAS1 domain 203 350 IPR036378 -
Gso15g1279 426 SUPERFAMILY FAS1 domain 33 188 IPR036378 -
Gso15g1279 426 Gene3D FAS1 domain 27 187 IPR036378 -
Gso15g1279 426 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 424 IPR033254 -
Gso15g1279 426 SUPERFAMILY FAS1 domain 209 349 IPR036378 -
Gso15g1279 426 ProSiteProfiles FAS1/BIgH3 domain profile. 32 185 IPR000782 -
Gso15g1279 426 ProSiteProfiles FAS1/BIgH3 domain profile. 202 347 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1279 Gso-Chr15 13060336 13062514 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1279 - - gmx:100788356 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1279 15 13060336 13062514 Gso9g0413 9 4091534 4093247 GST