Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0397 ATGGAGGGGGAACCGAGCCAGCTGAAGCGTGCCGCGATTGATGCCTCTGCTGGAGCTATCTCCGGTGGCATATCCAGGACAGTGACGTCACCTCTCGATGTTATTAAGATTAGGTTCCAGGTTCAACTAGAGCCCACATCTTCATGGACTTTACTACGCAAGGATTTGTCTACACCTTCAAAGTATACTGGCATGCTTCAAGCAAGCAAAGATATTTTTAGAGAAGAAGGCATATGGGGTTTTTGGCGGGGCAATGTGCCAGCTTTGCTCATGGTTATGCCATATACAGCTATACAATTTACTGTTCTACACAAGTTGAAGACTTTTGCCGCTGGTTCTTCCAAGACAGAGAATCACATTAATTTGAGCCCTTATCTATCCTACATGAGTGGGGCATTAGCTGGGTGTGCTGCTACAGTAGGGTCATATCCCTTTGATCTTCTCCGAACCATATTAGCTTCCCAGGGTGAACCGAAGGTTTATCCAAACATGAGGGCAGCATTAGTTGATATTCTCCAGACTCGTGGCTTCCGAGGCTTGTATGCTGGACTGTCACCAACCCTAGTTGAGATTATACCTTATGCAGGTCTACAATTTGGCACCTATGATACATTTAAACGTTGGACCATGGCGTGGAATCAGCGCCAATATTCAAATCCTACTGCAGAAAGCCTCTCTAGCTTTCAGCTTTTCCTGTGTGGGTTGGCTGCAGGAACATGTGCCAAGCTCGTCTGTCATCCACTTGATGTGGTCAAAAAAAGATTTCAGATTGAAGGTCTTCAAAGACATCCAAGATATGGAGCTCGGGTTGAACATCGTGCCTACAAAAATATGTTAGATGCCATGAAAAGAATATTACAGATGGAGGGTTGGGCTGGTCTATATAAGGGGATACTCCCATCAACTGTTAAAGCTGCACCAGCTGGTGCTGTAACATTTGTTGCGTATGAATTGACAGTAGATTGGCTGGAATCTATTTTGACTTGA 987 0.4498 MEGEPSQLKRAAIDASAGAISGGISRTVTSPLDVIKIRFQVQLEPTSSWTLLRKDLSTPSKYTGMLQASKDIFREEGIWGFWRGNVPALLMVMPYTAIQFTVLHKLKTFAAGSSKTENHINLSPYLSYMSGALAGCAATVGSYPFDLLRTILASQGEPKVYPNMRAALVDILQTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMAWNQRQYSNPTAESLSSFQLFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYKNMLDAMKRILQMEGWAGLYKGILPSTVKAAPAGAVTFVAYELTVDWLESILT* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0397 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 109 IPR018108 -
Gso9g0397 328 Gene3D Mitochondrial carrier domain 6 325 IPR023395 -
Gso9g0397 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 208 IPR018108 -
Gso9g0397 328 PANTHER SOLUTE CARRIER FAMILY 25 4 327 - -
Gso9g0397 328 Pfam Mitochondrial carrier protein 14 110 IPR018108 -
Gso9g0397 328 Pfam Mitochondrial carrier protein 123 209 IPR018108 -
Gso9g0397 328 Pfam Mitochondrial carrier protein 225 323 IPR018108 -
Gso9g0397 328 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 4 327 - -
Gso9g0397 328 SUPERFAMILY Mitochondrial carrier 10 317 IPR023395 -
Gso9g0397 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 322 IPR018108 -
Gso9g0397 328 PRINTS Mitochondrial carrier protein signature 14 27 IPR002067 GO:0055085
Gso9g0397 328 PRINTS Mitochondrial carrier protein signature 27 41 IPR002067 GO:0055085
Gso9g0397 328 PRINTS Mitochondrial carrier protein signature 84 104 IPR002067 GO:0055085
Gso9g0397 328 PRINTS Mitochondrial carrier protein signature 137 155 IPR002067 GO:0055085
Gso9g0397 328 PRINTS Mitochondrial carrier protein signature 181 199 IPR002067 GO:0055085
Gso9g0397 328 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0397 Gso-Chr9 3864287 3868682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0397 4 328 Organic Solute Cotransporters AT3G21390 75.152 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0397 K15108 - gmx:100803750 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1258 15 12770956 12775416 Gso9g0397 9 3864287 3868682 GST
Gso7g2103 7 44893089 44896468 Gso9g0397 9 3864287 3868682 PCT
Gso17g0200 17 1874174 1877582 Gso9g0397 9 3864287 3868682 PCT
Gso9g0397 9 3864287 3868682 Gso7g2103 7 44893089 44896468 PCT
Gso9g0397 9 3864287 3868682 Gso17g0200 17 1874174 1877582 PCT