Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0383 ATGGGTGCGATGACCGCAAACCGGAAGCGCTCCGAAGAATGCATGAACGTAAACCACACAAATTCCGATTCTCCGAGAAAACGCGCCAAATTCTCGATCAAACCCGTTCCGTCCGCCACCAGCGCCGTCGCGAGACTCTCCCGGTACCCAGAGGTTCACGCGCCGTTGGCGAGGGAGGTTCACGCGCCGTGCCGGTCGCGAAAATTCGAACGCTCTAGGGTTATTGTCAGTGCCGGCAACGTCATGGGGAACTTTCTGGCAACGAAGTTCAAGGAGGCGAAGCGTTCGGCGTCGGCGAAATGCAGGAACCTGGTGGAGAAGGGGAAGGAGGTGATTGAGGTGGACGCAGAGACGGAGAGTGAAGAGCGTTACGTGGATTCGAGTGTGGAAGAGGCGCGTGGCGATGGTGACAAGGTTGTCAGGGTTCAGCAGCAGTCGCAGTCAACGTTGTCGTTTGATTCGGAGATGATGAATGCGGAGTTGAAGATGGTGAGTGGTGGGAAGGTGTGGGGTTATGAGACGCAGCGTGATTTGGAAAATGTTCATATGTATAAGAAGTTGCTTGAGGATGTTGGGAGGAGAAGTGGCACGCTTCAGAGGCTGAATTTTGAGATTGATTTGAATGAGAAGCGCAGGGAACATTATAATTTGTTGCGGCCGAAGAAGGAATTGGTTGAGGAACAGGAAGTGCCGCAAGAGCCTTTTGTTGCTCTTACAAGTGAGGAGGAAGATGAGGTTGAATGTGCCTTTTCTTCCAACTGGAGGAGGATCTTGGTTACCCACGAGAATTCTAACATTGTGATCACGGGAGAGAAGTTTCAGTGCCTTAGGCCCACTGGATGGTTAAATGATGAGGTTATAAATTTGTACCTGGAATTGCTTAAGGAGAGGGAGCAAAGAGAACCACAGAAATTTCTGAAATGTCATTTTTTCAATACCTTTTTCTACAAAAAGTTAATAAGTGGGCCGAAAGGTTATGATTTCAAATCTGTCAGAAGATGGACAACCCAACGGAAATTGGGATACAGTCTACTTGAATGTGATAAAATATTTGTACCTATCCATCAAGAGATACATTGGTGCTTGGCAGTTATCAATAAGAAAGATAAGAAATTCCAGTATCTTGACTCAATGAAAGGAGAGGATAGTTTTGTGCTAGAAAAGCTGGCTAAATATTTTGCGGATGAAGTAAATGACAAGACTGGAAAACATATTGATGTAAATACCTGGAAAAAAGAATTTGTGAAAGACCTTCCTGTGCAGAAAAATGGGTATGATTGTGGGGTGTTTATGATCAAATATGCAGACTTTTATAGCAGGGGTCTGGAATTGTGTTTTAACCAGGAAAACATGTCCTACTTTCGGCGTAGGACGGCTAAGGAGATCTTGAGATTGAAAGCTGAATGA 1407 0.4591 MGAMTANRKRSEECMNVNHTNSDSPRKRAKFSIKPVPSATSAVARLSRYPEVHAPLAREVHAPCRSRKFERSRVIVSAGNVMGNFLATKFKEAKRSASAKCRNLVEKGKEVIEVDAETESEERYVDSSVEEARGDGDKVVRVQQQSQSTLSFDSEMMNAELKMVSGGKVWGYETQRDLENVHMYKKLLEDVGRRSGTLQRLNFEIDLNEKRREHYNLLRPKKELVEEQEVPQEPFVALTSEEEDEVECAFSSNWRRILVTHENSNIVITGEKFQCLRPTGWLNDEVINLYLELLKEREQREPQKFLKCHFFNTFFYKKLISGPKGYDFKSVRRWTTQRKLGYSLLECDKIFVPIHQEIHWCLAVINKKDKKFQYLDSMKGEDSFVLEKLAKYFADEVNDKTGKHIDVNTWKKEFVKDLPVQKNGYDCGVFMIKYADFYSRGLELCFNQENMSYFRRRTAKEILRLKAE* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0383 468 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 1 179 - -
Gso9g0383 468 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 181 467 - -
Gso9g0383 468 Pfam Ulp1 protease family, C-terminal catalytic domain 281 462 IPR003653 GO:0006508|GO:0008234
Gso9g0383 468 SUPERFAMILY Cysteine proteinases 234 466 IPR038765 -
Gso9g0383 468 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 181 467 - -
Gso9g0383 468 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 1 179 - -
Gso9g0383 468 ProSiteProfiles Ubiquitin-like protease family profile. 266 438 IPR003653 GO:0006508|GO:0008234
Gso9g0383 468 Gene3D Adenoviral Proteinase; Chain A 224 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0383 Gso-Chr9 3731985 3737291 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0383 K08592 - gmx:100802161 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2087 7 44781605 44788687 Gso9g0383 9 3731985 3737291 PCT
Gso17g0214 17 1987327 1993228 Gso9g0383 9 3731985 3737291 PCT
Gso9g0383 9 3731985 3737291 Gso7g2087 7 44781605 44788687 PCT
Gso9g0383 9 3731985 3737291 Gso17g0214 17 1987327 1993228 PCT