Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0214 ATGGCCGTCGTAACCAGCAACGGCAAGCGCCGCCAACATTGGCCATCCGCGAATTACCACTTTCCATCTCCCAATTCCAAAAGACCCAGAGTTTCAACAATGTCCCAAAACCACGCGCAATCCTTGTTATCCTCGACTAGTATCATTTCAAGAATCTCTAAGTACCCCGAAACCAAGCCACCACTGCATAGGGAGGTTCACGCCCCGTGTAGACCACGTAAGTTTGATTCTCCTGCCTTCAATAGAAGTTTTCATTATCCTCGCAAAGAAGAGATTAGTTACGACAAGGGCAACGTGCTCAGTAAAAACTACCAAAGGGCGAAAAATTCTGCGTTGGCTAGCATTAGGTTTGGGGAAAAGGGCAAGGAGGTGATAGAAGTGGATGCTGATAGTTCCAAGGGTATGGTGTCGGAGGATTCGAGTGTGGAAGAAGATGGACGAGAGCACAAGTGGCAAGAAGGTGGTGATTTGGTTGTGACTGAGGTGAAGGATTTGGATGCTAATAAGGATATGCATGGTGTCCCTCAGCAGCAGTCAACTTCTTCCGTTGTTTCTGAGTTGACTAACGGTGATCTGAATGTGGTTAATGCTGAGAAGATGTTGGACACTCTTTCTTTGACTCCTGAGCATGATCTTTCCTCCGTTCAAGCCTACAAGAAGTTGCTCGATGCTCTTGGCCAACGAAATGATACGCTTGAGAGGCTGAAGGCTGAAATTCAAGTTAACGAGAAGCGTATGTCCACATTTGAATTGTTGCGCCCAAAGAAGGAACTAGTTGAGGAAGTTCCATTGGAACCTTTTATTCCTCTTACTAAAGAGGAAGAAGTTGAGGTTGCACATGCCTTTTCTGCCGACAGGAAAAAGATCTTGGTTTCCCATGAGAAATCTGGCATTGAGATCTCTGGAGAAAAGTTTCAATGCCTTAGACCGGGTGCATGGTTAAACGATGAGGTAATAAATATGTACCTTGAATTGCTGAAAGAGAGGGAGAGAAGAGAACCACTGAAGTTTCTGAACTGTCATTTTTTCAATACCTTTTTCTACAAAAAGTTAATAAGTGGCAAGAATGGGTATGATTTCAAATCTGTGAGGAGATGGACCAGCCAAAAGAAATTGGGATATGGCCTACATGAATGTGATAAAATATTTGTACCTATTCATAAAGAGATTCATTGGTGCTTGGCTGTTATCAATAAGAAAGATAAGAAATTTCAGTATCTGGACTCACTGAGAGGAACAGATGCCCGAGTGATGAAAATTCTGGCTAGCTATATTGTAGATGAAGTAAAGGACAAGACTGGAAAAGATATTGATGTAAGTTCTTGGAAAAAAGAATTTGTTGAAGACCTTCCTGAGCAGCAGAATGGGTATGATTGTGGGGTGTTTATGATCAAATATGCTGACTTCTATAGCAGAAACTTGGGGTTGTGTTTCAACCAGGAACACATGTCTTACTTTCGGCGCAGAACAGCTAAAGAAATCTTGAGATTAAAAGCTAACTAA 1503 0.4245 MAVVTSNGKRRQHWPSANYHFPSPNSKRPRVSTMSQNHAQSLLSSTSIISRISKYPETKPPLHREVHAPCRPRKFDSPAFNRSFHYPRKEEISYDKGNVLSKNYQRAKNSALASIRFGEKGKEVIEVDADSSKGMVSEDSSVEEDGREHKWQEGGDLVVTEVKDLDANKDMHGVPQQQSTSSVVSELTNGDLNVVNAEKMLDTLSLTPEHDLSSVQAYKKLLDALGQRNDTLERLKAEIQVNEKRMSTFELLRPKKELVEEVPLEPFIPLTKEEEVEVAHAFSADRKKILVSHEKSGIEISGEKFQCLRPGAWLNDEVINMYLELLKERERREPLKFLNCHFFNTFFYKKLISGKNGYDFKSVRRWTSQKKLGYGLHECDKIFVPIHKEIHWCLAVINKKDKKFQYLDSLRGTDARVMKILASYIVDEVKDKTGKDIDVSSWKKEFVEDLPEQQNGYDCGVFMIKYADFYSRNLGLCFNQEHMSYFRRRTAKEILRLKAN* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0214 500 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 1 144 - -
Gso17g0214 500 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 151 499 - -
Gso17g0214 500 Coils Coil 215 252 - -
Gso17g0214 500 Pfam Ulp1 protease family, C-terminal catalytic domain 313 494 IPR003653 GO:0006508|GO:0008234
Gso17g0214 500 ProSiteProfiles Ubiquitin-like protease family profile. 298 470 IPR003653 GO:0006508|GO:0008234
Gso17g0214 500 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 151 499 - -
Gso17g0214 500 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 1 144 - -
Gso17g0214 500 Gene3D Adenoviral Proteinase; Chain A 258 498 - -
Gso17g0214 500 SUPERFAMILY Cysteine proteinases 266 499 IPR038765 -
Gso17g0214 500 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0214 Gso-Chr17 1987327 1993228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0214 K08592 - gmx:100797013 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0214 17 1987327 1993228 Gso17g0214 17 1987327 1993228 ECH
Gso7g2087 7 44781605 44788687 Gso17g0214 17 1987327 1993228 GST
Gso17g0214 17 1987327 1993228 Gso9g0383 9 3731985 3737291 PCT
Gso9g0383 9 3731985 3737291 Gso17g0214 17 1987327 1993228 PCT