Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0351 ATGATGTGTTTCCAAGTGGGTAACCTTCCCCATAAAGAGAAAGAACACCCCATTTTCTGTTTTTCTCTGTTACGTTTCAGATTTCACTTCTTAAGCCCAAAATTTATCATATTTTTCCAAACCCCATTATTATTTCCTCCTCCAAAAAACTCGTTCCCGTTTTCTTCATTCGTCGCGTTATTTTTTCGATTCTTGAGGCGCGTGGCCGATCTCTGGCGGTGCATGGCGGCGGGGACAATGGCGACGGCGGCCGGCGCGGCGGTGATGCTCTACTACGTGTTGAGCCGGCGGCTGGCGCGGAAGGAGGAGGACGAAGGCGAGGATCACGGCGGCGAGGTGTCGAAATCGAGCAGATCGGTTCGCCGGAGAAGGATTTCACGGCGGCCGGCGCAGGCTCCGGCGACGCTGCTGGAATCAATCGTGACGCTGTCAGAGACTTTAAGGTTCACTTATTCCGAGACTCTCGGGAAGTGGCCCATCGGCGATTTGGCCTTCGGCATCAACTACTTCATGCGCAAGCAGGGTAATTTAGCTGTTGCAAGTGTGTATGCTGGGAGTGATTGTGTGCAGCTCAAAGGGGATGAGATAATTGTGGAGCTCTATGAGTTGTTGAGGCTTTTAACTTTGTGTATGCTTTTCTCCAAGAAGCCATTTCCTGTGTTTTTAGATTCTGCTGGGTTTTCCCTTGATGATGTGCTCATTCAGAAGCCAAAAGCTGGGCTTCTGAAGCCTGCATTTACCATTATACGTGATACACAGTCAAAATGTTTACTTCTATTGATCCGGGGTACTCATAGCATAAAAGACACACTGACAGCTGCAACTGGTGCTGTTGTCCCCTTCCACCATTCAGTGTTAAATGATGGTGGGATAAGCAACTTGGTTTTAGGATATGCACACTGCGGTATGGTTGCTGCAGCTCGTTGGATTGCAAAGCTCTGCACTCCTACCCTACTTAAGGCTCTTGGTGAATGTCCACACTTCAAAGTCAAGATTGTTGGGCACTCACTTGGTGGTGGTACTGCTGCACTGTTAACATATATTCTTAGAGAGCAGAAAGAGTTCTCTTCAAGCACGTGCGTCACATTTGCCCCAGCTGCTTGCATGACATGGGAGTTAGCAGAATCAGGAAAACACTTTATCACTACCATCATCAATGGTTCTGACTTGGTGCCAACATTCTCAACTTCATCTATTGATGATCTCCGTTCTGAGGTCACTGCATCCTCTTGGTTGAATGATCTACGGGATCAGGTTGAACATACAAAGGTCCTGAATGTTGTTTACCGCTCTGCAACTGCACTTGGGTCTCGCTTACCATCTATATCTAGTGCAAAAGCTAGGGTAGCTGGTGCTGGTGCTATTCTGTGGCCAGTAACCAGTGGCACTCAGGTTGTGATGAAGCGTGCACAAAGTGTTGCTGAAGCTGTTGTCAGAACTCGCTCATCATTGTCATCATGGTCTTGCATGAGTGCCCGGCGTCGAAATGTGGGTCCATCAGTAAACTCTAAAACTGAGGACTTAACTGAAACCTCTCTAATATCCGAGAGAAGCACTGATTCTCACATGACTGAAGAGGTAGTAAGAGAACCTATGCTTAAGGACGAAAGTACTTCCTCAAGTGGAGGATCTGGCCATGATGACACTGATGAAGAGGAACAACTCATTCCTGCTAATGAAGACATTACTGCGTCTGCCGTTGACGACTTCACAGAAGGCCAGTTATGGTATGAACTGGAGAAGGAGCTTCAGAGACAGGATAATACTATGAACATTGATGCTCAAGAAGAGGCTGCAGCAGCAAAAGAGATCACAGAAGAAGAGAATCAACTGGTTGATGCTGCTGCAGAATGCAGTTGCAGTTCAATCACAACATCAGACAACTTGGACAGCCATCGATTTTATCCCCCTGGCAGGATCATGCACATTGTCTCCGTACCTTTGTCGGATGAGTCAAATTCAAATCCTGATGACCCTTTAGAAGAACATGTCGGCTTATATGAAACACCTAGAGAGCTGTACAGCAAACTCAGACTTTCAAGAACCATGATCAATGATCATTACATGCCAATGTATAAGAAGATGATGGAACTATTAATCCGAGAACTAGAGAAAGAAGGCAGCTGTAATGTTTTGGATTAA 2142 0.465 MMCFQVGNLPHKEKEHPIFCFSLLRFRFHFLSPKFIIFFQTPLLFPPPKNSFPFSSFVALFFRFLRRVADLWRCMAAGTMATAAGAAVMLYYVLSRRLARKEEDEGEDHGGEVSKSSRSVRRRRISRRPAQAPATLLESIVTLSETLRFTYSETLGKWPIGDLAFGINYFMRKQGNLAVASVYAGSDCVQLKGDEIIVELYELLRLLTLCMLFSKKPFPVFLDSAGFSLDDVLIQKPKAGLLKPAFTIIRDTQSKCLLLLIRGTHSIKDTLTAATGAVVPFHHSVLNDGGISNLVLGYAHCGMVAAARWIAKLCTPTLLKALGECPHFKVKIVGHSLGGGTAALLTYILREQKEFSSSTCVTFAPAACMTWELAESGKHFITTIINGSDLVPTFSTSSIDDLRSEVTASSWLNDLRDQVEHTKVLNVVYRSATALGSRLPSISSAKARVAGAGAILWPVTSGTQVVMKRAQSVAEAVVRTRSSLSSWSCMSARRRNVGPSVNSKTEDLTETSLISERSTDSHMTEEVVREPMLKDESTSSSGGSGHDDTDEEEQLIPANEDITASAVDDFTEGQLWYELEKELQRQDNTMNIDAQEEAAAAKEITEEENQLVDAAAECSCSSITTSDNLDSHRFYPPGRIMHIVSVPLSDESNSNPDDPLEEHVGLYETPRELYSKLRLSRTMINDHYMPMYKKMMELLIRELEKEGSCNVLD* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0351 713 SUPERFAMILY alpha/beta-Hydrolases 230 397 IPR029058 -
Gso9g0351 713 MobiDBLite consensus disorder prediction 519 533 - -
Gso9g0351 713 Pfam Lipase (class 3) 259 395 IPR002921 GO:0006629
Gso9g0351 713 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 75 706 - -
Gso9g0351 713 Coils Coil 597 617 - -
Gso9g0351 713 MobiDBLite consensus disorder prediction 495 552 - -
Gso9g0351 713 MobiDBLite consensus disorder prediction 104 119 - -
Gso9g0351 713 MobiDBLite consensus disorder prediction 495 518 - -
Gso9g0351 713 CDD Lipase_3 250 401 - -
Gso9g0351 713 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 75 706 - -
Gso9g0351 713 Gene3D alpha/beta hydrolase 230 431 IPR029058 -
Gso9g0351 713 Pfam Lipase 3 N-terminal region 124 198 IPR005592 GO:0016042
Gso9g0351 713 MobiDBLite consensus disorder prediction 104 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0351 Gso-Chr9 3393181 3398594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0351 75 704 Acyl Lipid Metabolism Gene Families AT4G16070 66.063 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0351 - - gmx:100812454 1290.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0234 17 2156187 2160480 Gso9g0351 9 3393181 3398594 PCT
Gso9g0351 9 3393181 3398594 Gso17g0234 17 2156187 2160480 PCT