Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g0234 ATGATCGAAAGAAGCAAGGGCATTGTGGTCATAATGCAACTAAGCAAGCTTCTTGTTCCGGGAAAGGCACTTTCTCAGCGGTTCCTCTCACGTTTCTGTTTCAGACACTCCAACCAGATTCCAAACTCCAATTTTTATGTTTCCTTTTTTCTTCCATTTTCCCAAACCACATTGTTCTTCTCCGCCGATTCCATGACTGCCGGGGCAGTGGCGACGGCAGCCGGAGCGGCGGTGATGCTGTACCTCGTATTCCGGCGGAGGAGGAAGGCCGAAAAGGAGTGGTCGAGGTCGCGGACGACGTGGAGGTTGAAGCCAGCTCAGGCGCCGGCGAATATGTTAGAATCGATTGCGACGTTATCGGAGACGTTGAGGTTCACTTACTCGGAGACTATTGGGAAATGGCCAATCGCCGACTTGGCCTTCGGCATCAATTACTTGATGCGCAAACAGGGTGATTTGGCAGTTGCGAGTGTGTATGGTGGAAGCAGTTGTGTGGAGCTGAAAGGCCCTGGAGTTGTAGATGAGTTACAAGAGCTTTTGAGGTTGTTGACTTTGTGCATGCTTTTCTCCAAGAAACCGTTTCCCGAGTTTTTAGATTCTGCCGGATTCTCTCTAGACCATGTTCTTCTTCACAACCCCGAAGCTGGGCTTCTGAAGCCCGCTTTCACAATTATACATGATACGCAGTCAAAATGTTTCCTTCTATTGATCCGGGGAACCCATAGCATAAAAGACACACTGACAGCTGCAACTGGTACTGTGGTTCCCTTTCACCATTCCATTTTAAATGATGGAGGAATAAGCAACTTGGTTTTAGGATATGCACACTGTGGTATGGTTGCTGCAGCTCGTTGGATTGCAAAACTCTGCACTCCTACACTACTTAAAGCCCTTAATAAATGTCCAGACTCAGAAGTCAAGATTGTTGGACACTCACTTGGTGGTGGTACTGCAGCACTATTAACATATATTCTTAGAGAACAAAAAGAGTTATCTTCAAGCACCTGTGTCACATTTGCCCCAGCTGCTTGTATGACATGGGAGTTAGGTGAATCAGGGAAGCACTTCATCACTACCATTATAAATGGTTACGACTTGGTACCCACATTATCAGCTTCCTCTGTTGATGATCTCCGATCTGAGGTTGCTGCGTCATCTTGGATGAGTGATTTATGGGATCAGGCCGAGCATACAAAGGTTCTGAAAGCCGTCCACAACTCAGCAACTGCACTTGGATCTCACTTACAATTCATATCTAGTGCAAAAGACAAGGTAGCTGGTGTAGGTGCTATTCTACGGCCTGTGACCAGTGGCACCCAGGTTGTGATGAAGCATGCACAAAGTGTTGTCGAAGCTGTTGTCAAAACTATGGCTTCACACCGTCAGAATATTGGACCATTGCCAAAATCTAAATTAAATAACTTGGCCGAATCTTCTCTGGAACCCAAAAATATAAGTAAATCTCTTTTGACTGAAAGTGTGCCTGTGCTGAATAAGGATGAACCAAACTACTCAAGTGGAAGATCTGGACTTGATGCCATAGATGAAGAGGAGCAACTGATTGATGCTAACGAGCACATTACCTCTTCTGTTGTAAATGACATCACTGAAGGTGAATTGTGGTATGAGCTGGAGAAGGAACTTGAAAAACAGAACAATATCCTGAACATTCGGGCGCAGGTAGAAGAGGCAGCTGCAGCAAAAGAGATAACTGAGGAAGAGAATCAGCTTATTGATGCTGCACAAGGCACCAGCAATTCAATCACGGCATCTGACAAAGTAGATAGCTATCGTTTTTATCCCCCAGGTAAAATCATGCACATTGTCTCCACTCCTTCGTCAGATGACTTTAGTTCAAGCTCCATTGAGGAACATGTCAAATTATATGAAACACCTAGACAGCTTTATAGCAAGCTCAGACTTTCAAGAACGATGATAAATGATCATTACATGCCCACATATAGGAAGATGATCCAACTATTAATCAGACAACTAGAGAAAGATATAATGTGA 2013 0.4471 MIERSKGIVVIMQLSKLLVPGKALSQRFLSRFCFRHSNQIPNSNFYVSFFLPFSQTTLFFSADSMTAGAVATAAGAAVMLYLVFRRRRKAEKEWSRSRTTWRLKPAQAPANMLESIATLSETLRFTYSETIGKWPIADLAFGINYLMRKQGDLAVASVYGGSSCVELKGPGVVDELQELLRLLTLCMLFSKKPFPEFLDSAGFSLDHVLLHNPEAGLLKPAFTIIHDTQSKCFLLLIRGTHSIKDTLTAATGTVVPFHHSILNDGGISNLVLGYAHCGMVAAARWIAKLCTPTLLKALNKCPDSEVKIVGHSLGGGTAALLTYILREQKELSSSTCVTFAPAACMTWELGESGKHFITTIINGYDLVPTLSASSVDDLRSEVAASSWMSDLWDQAEHTKVLKAVHNSATALGSHLQFISSAKDKVAGVGAILRPVTSGTQVVMKHAQSVVEAVVKTMASHRQNIGPLPKSKLNNLAESSLEPKNISKSLLTESVPVLNKDEPNYSSGRSGLDAIDEEEQLIDANEHITSSVVNDITEGELWYELEKELEKQNNILNIRAQVEEAAAAKEITEEENQLIDAAQGTSNSITASDKVDSYRFYPPGKIMHIVSTPSSDDFSSSSIEEHVKLYETPRQLYSKLRLSRTMINDHYMPTYRKMIQLLIRQLEKDIM* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g0234 670 CDD Lipase_3 191 371 - -
Gso17g0234 670 SUPERFAMILY alpha/beta-Hydrolases 208 373 IPR029058 -
Gso17g0234 670 Coils Coil 554 574 - -
Gso17g0234 670 Gene3D alpha/beta hydrolase 204 421 IPR029058 -
Gso17g0234 670 Pfam Lipase (class 3) 235 372 IPR002921 GO:0006629
Gso17g0234 670 Pfam Lipase 3 N-terminal region 105 180 IPR005592 GO:0016042
Gso17g0234 670 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 65 668 - -
Gso17g0234 670 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 65 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g0234 Gso-Chr17 2156187 2160480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g0234 65 668 Acyl Lipid Metabolism Gene Families AT4G16070 58.270 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g0234 - - gmx:100801263 1257.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0234 17 2156187 2160480 Gso17g0234 17 2156187 2160480 ECH
Gso17g0234 17 2156187 2160480 Gso9g0351 9 3393181 3398594 PCT
Gso9g0351 9 3393181 3398594 Gso17g0234 17 2156187 2160480 PCT