Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0347 ATGGTGGTCCTCACTTTCACAGATGAGTTCACTAGCAGTGTCCAGCCAAGAAGATTGTTCAAGGCTTTGATCCTTGATGCTCCTAACCTCATCCCCAAGCTGATGCCTGAGGCCATTAAGAATGTTCAACTGGCTGAAGGGAATGGAGGCCCTGGAAGCATTCAGGAGATAACTATTGCTGAAGGTGGTAACATCAAACAGTTGAAGCATAGAATTGATGCAATAGACCTTGAGAAATTGACTTACAGCTACGCAGTGATTGATGGGGATGCTGCACTGGAAAAAGTGGATTCAATTTCACATGAGATTAAGTTCGAGGCCACTGAAGAGGGAGGTTGCAAGACCAAGAATGTTAGCAAGTATCATCCCAAAGAAGGAGTTGATGTTAAAGAGGAGGATTTCAAGGCTGCAAGAGAGGAAGGTTTGGCTCTCCTCAAGGTAGTGGATGCCTATCTTGTGGCAAACCCTGAGGCCTATGCTGAAGGAACTATAAATAGCGATGAGTTTACTAGCACTGTCCAGCCAGGAAGGTTGTTCAAGGCTTTGGTCCTTGATGCTCCAAACCTCATTCCCAAGCTGATGCCCGAGGCCATTAAGAATATTCAACTGGTTGAAGGGAATGGAGGCCCTGGAAGCATTCAGGAGATAACAATTGTTGAAGGTGATAAGATCAAACACTTGAAGCATAGAATTGATGTAATAGACCAAGAGAAGTTGACATACAGCTATGCAGTGATCGAGGGGGATGGTGCACTGGAAAAAGTGGATTCAATTGCACATGAGGTTAAGTTCGAGGCCACCGAAGAGGGAGGTTGCAAGATCAAGAATGTCAGCAAGTATCATCCCAAAGTAGGGGTTGATGTCAAAGAGGAAGATTTCAAGGCTGCAACTGAGGAAGGTTTGGCTCTCCTCAAGGTAGTGGATGCCTATCTTGTGGCAAACCCTGAGGCCTATGCTTGA 960 0.4562 MVVLTFTDEFTSSVQPRRLFKALILDAPNLIPKLMPEAIKNVQLAEGNGGPGSIQEITIAEGGNIKQLKHRIDAIDLEKLTYSYAVIDGDAALEKVDSISHEIKFEATEEGGCKTKNVSKYHPKEGVDVKEEDFKAAREEGLALLKVVDAYLVANPEAYAEGTINSDEFTSTVQPGRLFKALVLDAPNLIPKLMPEAIKNIQLVEGNGGPGSIQEITIVEGDKIKHLKHRIDVIDQEKLTYSYAVIEGDGALEKVDSIAHEVKFEATEEGGCKIKNVSKYHPKVGVDVKEEDFKAATEEGLALLKVVDAYLVANPEAYA* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0347 319 Gene3D - 2 158 IPR023393 -
Gso9g0347 319 Gene3D - 163 317 IPR023393 -
Gso9g0347 319 SUPERFAMILY Bet v1-like 167 318 - -
Gso9g0347 319 CDD Bet_v1-like 5 152 - -
Gso9g0347 319 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gso9g0347 319 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gso9g0347 319 PRINTS Major pollen allergen Bet V1 signature 50 59 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gso9g0347 319 PRINTS Major pollen allergen Bet V1 signature 66 85 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gso9g0347 319 PRINTS Major pollen allergen Bet V1 signature 85 98 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gso9g0347 319 PRINTS Major pollen allergen Bet V1 signature 110 126 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gso9g0347 319 PRINTS Major pollen allergen Bet V1 signature 144 154 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Gso9g0347 319 SUPERFAMILY Bet v1-like 4 159 - -
Gso9g0347 319 PANTHER - 166 319 - -
Gso9g0347 319 PANTHER - 1 160 - -
Gso9g0347 319 Pfam Pathogenesis-related protein Bet v 1 family 167 313 IPR000916 GO:0006952
Gso9g0347 319 Pfam Pathogenesis-related protein Bet v 1 family 1 154 IPR000916 GO:0006952
Gso9g0347 319 PANTHER PR-10 TYPE PATHOGENESIS-RELATED PROTEIN-RELATED 1 160 - -
Gso9g0347 319 PANTHER PR-10 TYPE PATHOGENESIS-RELATED PROTEIN-RELATED 166 319 - -
Gso9g0347 319 CDD Bet_v1-like 166 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0347 Gso-Chr9 3351427 3354241 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0347 - - gmx:100306381 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1215 15 12122858 12123887 Gso9g0347 9 3351427 3354241 GST
Gso7g2060 7 44555725 44556742 Gso9g0347 9 3351427 3354241 PCT
Gso17g0240 17 2194796 2195802 Gso9g0347 9 3351427 3354241 PCT