Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0319 ATGAGAGTTTTGGAGAGTGCTTCTCCGGTTGAATCTCTCACTCATCTGAGTATGGCTTTGCAGAAGTATGCTCCTTCTGGCAATGCACCTTCTGTTAATATAAAACATTTGAGCTTTTCCAGTAAGGTGCCCAAGAAAGCTGAGCTCGATGAGGCAAATCCGAATCATAACATGGATGTGGATATTGACCTTAGGGAAATTTATTTTCTTATTATGCACTTTCTTTCTGCTGGGCCATGTCATAAAACTTATATACAGTTTTGGAATGAGCTTCTTGAGCATCAACTTTTGCCTAGAAGGTATCATGCTTGGTATTCAAGGACCGGAGCATGTAGTGGAGACAAAGATGATGATGGTCTATCATTCCCTTTAAATTACAATATGTTAGTAGAGAGGTATTCCCATATTGAAAAGGATCACTTGGTAAAGCTTTTGAAGCAATTGTTATTAAATACAGCCTCCCCATCACTGGGTATGAATCTTGGAAATGCTCCAAATGCAGCTGATGTACCTACTCTTCTAGGAAGTGGTTCATTTTCACTTCTGAGCTATGATAGGGACAAAATGAAAGAAGTCAAACGGCCACCTCCTCATATGCGCTGGCCTCATATGAAAGCCAATCAGGTTCATGGGCTTAGTTTGAGGGAAATTGGGGGTGGTTTCCCAAGACACCATCGTGCACCATCTATACGTGCTGCATGCTATGCCCTTGCAAAACCTTCTACCATGGTGCAAAAGATGCAAAACATCAAGAGGTTAAGAGGACACCGCAATGCTGTCTATTGTGCTATATTTGATCGGTCAGGAAGATATGTGGTTACCGGTTCAGATGACCGACTTGTAAAAATTTGGTCAATGGAAACTGCATATTGTTTGGCCAGTTGCCGTGGACATGATGGTGACATCACTGACTTGGCTGTGAGTTCAAACAATGCTTTAGTTGCATCCTCATCAAATGACTGTGTCATTCGAGTTTGGCGCTTGCCAGATGGCTTGCCAATATCAGTTTTGCGGGGCCATACTGGAGCTGTTACAGCCATAGCATTTAGTCCCAGACTGAATGCTTTATACCAGCTTTTATCTTCCTCTGATGATGGAACTTGTAGGATATGGGATGCAAGGTATACCCAGTCAAGTCCAAGATTATATGTTCCAAGGCCTTCTGATTCTGTAATTGGGAAGAGCAGTGGCCCATCTTCAAGTACTGTACCACAGAGCCGTCAGATTTTTTGCTGTGCGTTTAATGCTAATGGAACTGTCTTTGTAACTGGTAGCTCTGACAATCTTGCTAGGGTGTGGAATGCTTGTAAGCTTAGTATGGATGACACTGACCAACCAATTCATGAGATAGATGTGCTATCTGGGCATGAAAATGATGTGAATTATGTGCAATTCAGTGGATGCGCAGTAGCATCCCGGTTTTCCACAGCAGAAACTCTGAAGGAGGAAAATATTCCCAAATTTAAAAATTCCTGGTTGAATCATGACAACATAGTTACCTGCTCTCGTGATGGGAGTGCTATTATATGGATTCCTAAATCACGCAGGTCACATGGAAAAAGTGGTCGCTGGACACGAGCGTATCATCTGAGAGTTCCACCTCCACCTATGCCACCTCAACCTCAAAGAGGTGGTCCTCGTCAGAGAATTCTACCAACTCCACGCGGTGTAAATATGATTGTTTGGAGCCTTGACAACCGCTTTGTCCTTGCTGCTATTATGGACTGCAGAATTTGTGTGTGGAATGCATCTGATGGAAGCTTAGTACACTCATTGACTGGGCATACTGAATCTACATATGTTCTGGATGTTCATCCTTTCAATCCCCGGATAGCTATGAGTGCTGGATATGATGGAAGAACTATCGTGTGGGATATATGGGAAGGCATGCCTATCCGGACATATGAGATATCACGTTTCAAGTTGGTGGATGGAAAGTTTTCTTCGGATGGGACATCAATTATACTTTCGGATGATGTTGGTCAACTATATATATTAAGCACAGGCCAAGGCGAGTCCCAGAAAGATGCCAAATATGATCAGTTTTTTCTTGGTGATTATCGACCTCTGATTCAAGACACTCATGGTAACGTACTAGACCAGGAAACTCAAATTGTTCCATATAGACGGAATCTGCAAGATTTGCTTTGTGATTCAGCAATGATACCATACCCAGAACCTTATCAGAGTGAATTTCAGCAAAGACGATTAGGAGCATTAGGCCTTGAGTGGCGCCCATCATCACTAAGGCTTGCTGTTGGTCCTGATTTCAGTCTGGACCCTGATTATCATATGCTTCCATTGGCAGACTTGGATTTGCTTACAGAACCACTGCCTGAGTTTATAGATGCTATGGAATGGGAACCTGAAGTTGAAGTGTTTAGTGATGATACAGATTCAGAATATAATGTCACAGAGGGTTTCTTTTCTAAGGGTGAGAAAGGAGGTTCAAGCTCCAATGCTTCTGGTGATTCAGGGTGCAGCACAGATAACAGTGAAGGGGAGGACACTTGCATGGATAGCATTCGTAGATCAAAGAGGAAAAAACAGAAGGCTGAGACTGAGGTTATGACTTCTTCTGGGAGACGTGTGAAACGGAGGAATTTGGATGAGCGTGATGGCAATACTTTCGGCAGTAGCCGAAGTAGGAAGGGAAAAAGTGTCCAAAAAACATCAAGAAGGAAATCTTCTAAATCAAAATCTTCCCGACCTCAAAGGGCTGCTGCACGCAATGCTCTGCATCTATTTTCCAAAATTACTGGTACACCAACAGATGGAGAAGAAGATAGTTTGGTTGGTGATTTTTCAGGTAGTGAATCAACATTGCAAGAGTCTAATATTGACAGTGATGAATCCGGTGGAACTTTACAGAATGAACAACTGAATTATTCTAAGGGAAAAGAAGTATCATATTATGAATCGGAGGACACCAAATCTCACGAGTTAACTGAAACTCATGTGAATTCGATGAACAAGAGGTTGGTTCTCAAGTTGCCAAATCGTGATATATCCAAGTCCACAAATGAGTTTGGCTACCAGGCTGAGTTGGTTGGCTCATCATCAAAAACTGCGCAAGAAGCTACCGATTTTAATGGGAACAGACCAAGTTCTAAGGATTCAGGGTATTGTTCTGGAAGTACAAGTTACCCTGCAGTTGAAAAAACAGATCAAGCAAAACTAGGCCAGGTGACAGACCATGTAGACTTGCTGGGGAAAATTAGATGGGGAATGGTTAGGGCTCGTTCATCTAAACCTTTGAGAGTGGGAGAAGCTATGCCATCAGACACAGATCCCTACTCTGGAAAATGTCCTAATCATCTCGATGAAAAAGAAAATGTTAGCAGTGGGCATGAGAAAGAGGACAAGAACTTTAGTGCACTAACCCCCGAGTTAACCCCTGAGTTAGAAATCCATAAGGATGACTATAGGGTAGATAGTTTGACAGAGATTAATGGTAAAAAAGAAAATGCTATCAGTGGGCACGAGAAAGAGGACAAGAACTTTAGTGCACTAACCCCTGAGTTAACCCCCGAGTTAGAAATCCAAAAGGATGACTATAAGGTAGATAGTTTGACAGAGATTAATGAAAATTGTGCTGGTACTACCTCACAGCCTTTTAATCTTACTGAAGATGGAGGAGAGATCACAGCTTCCAGCAATTGCAGGGACAAAAATGAATCACTAATTTCTGCTTATGTGATTCCTCAGGATATTGTAACTGCTTCCATTGGCTATAGTGAGGTTGACCAACTACCTGAACCAAATATTGGTTTTGCTTGTGTTTCAACAAAATTAAGGTCTAAAAGGGGTTCAAGGGATCCTGAAAGTCCATCCAAGCTTGAAACAAAATCTTCAGTGCTAAAGAATAGTGCATGTAGCACTAATGATAATAAAAATTTGAACAATGTGGTTGTGGATGACAGCAACAACACTAGAGTAGCGTCTAATCATGGAGAGAATGGATCTCAAGAAGTAGATCCTCAAATTAGACAAAATAGTACTTCACAGGATTTGCCAGAACCACATTCACACAGAGATAAAATGTATAAAGCTGTATATAGAAGATCAAGATCACATAGGGCTGTGACTAATTTAGCTGACAGTAGTGGCCAGGGAGAATCCAATTCAAATGGGAGAAACAGTAATTTCAATGCTGCAGCAAACTTCAGCAATGGCACATATGAAGCTATTCATACAAACGGATCCTTAGAGTTGGAGCCCACCTCTTCTGACCCAAATTATGAGCGGAATAATCTCAAAGTGCTGCAAGGACCGGGAAATTGTATTGTTAAAAGTCCACAGAATGTTTCCACAAGTGGAGGACAACTCACAGAAGAAGAAAGGTGTTCTAATTCAAAATTGACTGTTGGTTTGAGGTCCACTAGGAATCGGAGGTCTAGTTATAATATTCGTGAGACTAGTCCTGTAAATAAAAGGAAATCACTACAATCAGCTACCAGAGGATCATGGTTGTTGTTATCAACCCATGAGGAAGGATGCAGATATATTCCACAACAGGGGGATGAAGTTGTATATCTGAGACAGGGTCACCAGGAGTATATAAATTATTGCCGTAAAAGAGAGTCAGGGCCTTGGGTATCACTTAAGGGACATATAAGAGCTGTAGAATATTGTAGAGTTCAAAGTCTAGAGTATTCCCATCTTCCAGGGTCTGGTGATAGCTGCTGCAAAATGAACCTTCTGTTTGTAGATCCGAATTCAAGTGTTGTTGGAAAATCTTTTAAATTAACCCTACCTGAAGTAACCAGTTTCCCTGATTTTCTTGTTGAAAGAATTAGGTTTGACACTGCTATGCAAAGAAATTGGACTCGCAGGGATAAATGCAGGGTTTGGTGGAAGAATGAGGATAATTCCTCTGGTAATTGGTGGGATGGTCGAATTCTGTGCGTGAAAGCTAAGTCTTCTGAATTTCCAGACAGTCCATGGGAGAGTTGTACTGTTCGGTACAAGAGTGACCTCACTGAAACACATTTGCATAGTCCTTGGGAGCTTTTTGATGCTGATACTGAATGGGAACAGCCTCACATTGATGATGACATGAGAAATAAACTGCAATCCGCTCTCACCAAATTACAGCAGTCAGGCAACACAGTCCAGGATCGTTGTGGAGTGCATGAATTGAAGAAAATTTCAAACAAGTCCAAATTTATAAACAGGTTTCCTGTTCCTATATCCATTGAATTGATACAGTCAAGGTTGGAGAACAATTACTACCGTAGTTTGGAGGCGCTGAAGCATGATGTGACCATTCTACTGTCCAATGCCACCACTTTTCTCGAAAAGGATGCAGTGCTGTCAGCAAAAATCAAACGCCTATCAGAATGGTTCACACGGACACTATCATCTTTATAG 5373 0.4167 MRVLESASPVESLTHLSMALQKYAPSGNAPSVNIKHLSFSSKVPKKAELDEANPNHNMDVDIDLREIYFLIMHFLSAGPCHKTYIQFWNELLEHQLLPRRYHAWYSRTGACSGDKDDDGLSFPLNYNMLVERYSHIEKDHLVKLLKQLLLNTASPSLGMNLGNAPNAADVPTLLGSGSFSLLSYDRDKMKEVKRPPPHMRWPHMKANQVHGLSLREIGGGFPRHHRAPSIRAACYALAKPSTMVQKMQNIKRLRGHRNAVYCAIFDRSGRYVVTGSDDRLVKIWSMETAYCLASCRGHDGDITDLAVSSNNALVASSSNDCVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRLNALYQLLSSSDDGTCRIWDARYTQSSPRLYVPRPSDSVIGKSSGPSSSTVPQSRQIFCCAFNANGTVFVTGSSDNLARVWNACKLSMDDTDQPIHEIDVLSGHENDVNYVQFSGCAVASRFSTAETLKEENIPKFKNSWLNHDNIVTCSRDGSAIIWIPKSRRSHGKSGRWTRAYHLRVPPPPMPPQPQRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGMPIRTYEISRFKLVDGKFSSDGTSIILSDDVGQLYILSTGQGESQKDAKYDQFFLGDYRPLIQDTHGNVLDQETQIVPYRRNLQDLLCDSAMIPYPEPYQSEFQQRRLGALGLEWRPSSLRLAVGPDFSLDPDYHMLPLADLDLLTEPLPEFIDAMEWEPEVEVFSDDTDSEYNVTEGFFSKGEKGGSSSNASGDSGCSTDNSEGEDTCMDSIRRSKRKKQKAETEVMTSSGRRVKRRNLDERDGNTFGSSRSRKGKSVQKTSRRKSSKSKSSRPQRAAARNALHLFSKITGTPTDGEEDSLVGDFSGSESTLQESNIDSDESGGTLQNEQLNYSKGKEVSYYESEDTKSHELTETHVNSMNKRLVLKLPNRDISKSTNEFGYQAELVGSSSKTAQEATDFNGNRPSSKDSGYCSGSTSYPAVEKTDQAKLGQVTDHVDLLGKIRWGMVRARSSKPLRVGEAMPSDTDPYSGKCPNHLDEKENVSSGHEKEDKNFSALTPELTPELEIHKDDYRVDSLTEINGKKENAISGHEKEDKNFSALTPELTPELEIQKDDYKVDSLTEINENCAGTTSQPFNLTEDGGEITASSNCRDKNESLISAYVIPQDIVTASIGYSEVDQLPEPNIGFACVSTKLRSKRGSRDPESPSKLETKSSVLKNSACSTNDNKNLNNVVVDDSNNTRVASNHGENGSQEVDPQIRQNSTSQDLPEPHSHRDKMYKAVYRRSRSHRAVTNLADSSGQGESNSNGRNSNFNAAANFSNGTYEAIHTNGSLELEPTSSDPNYERNNLKVLQGPGNCIVKSPQNVSTSGGQLTEEERCSNSKLTVGLRSTRNRRSSYNIRETSPVNKRKSLQSATRGSWLLLSTHEEGCRYIPQQGDEVVYLRQGHQEYINYCRKRESGPWVSLKGHIRAVEYCRVQSLEYSHLPGSGDSCCKMNLLFVDPNSSVVGKSFKLTLPEVTSFPDFLVERIRFDTAMQRNWTRRDKCRVWWKNEDNSSGNWWDGRILCVKAKSSEFPDSPWESCTVRYKSDLTETHLHSPWELFDADTEWEQPHIDDDMRNKLQSALTKLQQSGNTVQDRCGVHELKKISNKSKFINRFPVPISIELIQSRLENNYYRSLEALKHDVTILLSNATTFLEKDAVLSAKIKRLSEWFTRTLSSL* 1791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0319 1790 MobiDBLite consensus disorder prediction 836 879 - -
Gso9g0319 1790 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 295 328 - -
Gso9g0319 1790 MobiDBLite consensus disorder prediction 807 958 - -
Gso9g0319 1790 MobiDBLite consensus disorder prediction 934 958 - -
Gso9g0319 1790 MobiDBLite consensus disorder prediction 886 901 - -
Gso9g0319 1790 Pfam WD domain, G-beta repeat 409 434 IPR001680 GO:0005515
Gso9g0319 1790 Pfam WD domain, G-beta repeat 586 625 IPR001680 GO:0005515
Gso9g0319 1790 Pfam WD domain, G-beta repeat 333 372 IPR001680 GO:0005515
Gso9g0319 1790 Pfam WD domain, G-beta repeat 291 326 IPR001680 GO:0005515
Gso9g0319 1790 Pfam WD domain, G-beta repeat 248 285 IPR001680 GO:0005515
Gso9g0319 1790 Pfam Bromodomain 1726 1774 IPR001487 GO:0005515
Gso9g0319 1790 MobiDBLite consensus disorder prediction 1266 1386 - -
Gso9g0319 1790 Gene3D - 1711 1790 IPR036427 GO:0005515
Gso9g0319 1790 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 253 288 - -
Gso9g0319 1790 ProSiteProfiles Trp-Asp (WD) repeats profile. 592 634 IPR001680 GO:0005515
Gso9g0319 1790 PANTHER WD REPEAT DOMAIN 9 26 1790 - -
Gso9g0319 1790 MobiDBLite consensus disorder prediction 1362 1386 - -
Gso9g0319 1790 ProSiteProfiles Trp-Asp (WD) repeats profile. 337 381 IPR001680 GO:0005515
Gso9g0319 1790 ProSiteProfiles Trp-Asp (WD) repeats profile. 253 294 IPR001680 GO:0005515
Gso9g0319 1790 MobiDBLite consensus disorder prediction 1019 1045 - -
Gso9g0319 1790 MobiDBLite consensus disorder prediction 812 835 - -
Gso9g0319 1790 PANTHER PH-INTERACTING PROTEIN-LIKE ISOFORM X1 26 1790 - -
Gso9g0319 1790 Gene3D - 475 683 IPR015943 GO:0005515
Gso9g0319 1790 SUPERFAMILY WD40 repeat-like 244 668 IPR036322 GO:0005515
Gso9g0319 1790 SUPERFAMILY Bromodomain 1724 1788 IPR036427 GO:0005515
Gso9g0319 1790 CDD Bromo_WDR9_I_like 1662 1790 - -
Gso9g0319 1790 ProSiteProfiles Bromodomain profile. 1730 1773 IPR001487 GO:0005515
Gso9g0319 1790 Gene3D - 406 472 IPR015943 GO:0005515
Gso9g0319 1790 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 337 372 - -
Gso9g0319 1790 CDD WD40 249 625 - -
Gso9g0319 1790 Gene3D - 230 405 IPR015943 GO:0005515
Gso9g0319 1790 ProSiteProfiles Trp-Asp (WD) repeats profile. 295 336 IPR001680 GO:0005515
Gso9g0319 1790 MobiDBLite consensus disorder prediction 1280 1338 - -
Gso9g0319 1790 ProSitePatterns Trp-Asp (WD) repeats signature. 612 626 IPR019775 -
Gso9g0319 1790 ProSiteProfiles Trp-Asp (WD) repeats profile. 402 434 IPR001680 GO:0005515
Gso9g0319 1790 SMART WD40_4 446 511 IPR001680 GO:0005515
Gso9g0319 1790 SMART WD40_4 585 625 IPR001680 GO:0005515
Gso9g0319 1790 SMART WD40_4 246 285 IPR001680 GO:0005515
Gso9g0319 1790 SMART WD40_4 396 434 IPR001680 GO:0005515
Gso9g0319 1790 SMART WD40_4 544 582 IPR001680 GO:0005515
Gso9g0319 1790 SMART WD40_4 330 372 IPR001680 GO:0005515
Gso9g0319 1790 SMART WD40_4 288 327 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0319 Gso-Chr9 3059003 3079896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0319 245 465 Miscellaneous Gene Families AT5G08390 23.661 3.46e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0319 K11797 - gmx:100819598 3476.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1186 15 11740884 11765730 Gso9g0319 9 3059003 3079896 GST