Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0318 ATGGTTTCTCTCTTTGCCAGAACCAAGAGGTTCTCATTGCCTACACTCGTGCTTCTTCTGGAGCTATTCACGATATACCTTCGCACTGCAGATGCTCAAATTGGGGTGTGTTATGGCATGATGGGCGACAATCTACCACCGGCAAATGAAGTTGTAAGTCTTTACAAATCCAACGACATAATGAGAATGAGAATCTATAATCCTGATCAAGCTGCTTTACAAGCACTGGGAAATTCGGGCATTGAGCTTATTCTTGGGGTGCTCCACCAAGACCTTCAAGGCCTTGCCACCAATGCTAGCACTGCTCAACAATGGGTGCAAAGTAACGTGTTGAACTTTTGGCCTAGTGTCAAAATCAAGCACGTGGTAGTTGGCAACGAAATCAATCCTGTGGGAAGCTCTTCTGAGTTTGCCCAATATGTTCTACCTGCAATCCAAAACATATACCAAGCTATAAGAGCTCAAGGCCTTCAAGATCTAATCAAGGTTACAACAGCTATTGACATGACCCTGTTAGGAAACTCCTACCCCCCATCACAAAGCTACTTCAGGACTGATGTGAGATCATACTTAGACCCCATAATTGGGTACTTGGTATATGCAAATGCACCTTTACTAGCCAATGTGTTGCCTTATTTTAGTTACTCCAATAACCCGATTGACATATCACTTTCCTATGCTCTTTTTAACTCAACAAATGTTGTGGTTTGGGATGGTCAATATGGGTACCAAAATTTGTTTGATGCTATGTTGGATGCGGTGCATGTTGCAATTGATAACACAGGGATTGGTTATGTGGAGGTTGTTGTATCCGAGAGTGGATGGCCCTCAGATGGAGGGTTTGCTGCCACTTATGACAACGCACATGTCTACCTGGAAAATTTGATTCTTCGTGCTAAAAGAGGTAGCCCAAGAAGACCTTCAAAGCCCACAGAAACTTATATATTCGATATGCTTGATGAGAATCTTAAGAGTCCTGAGATAGAGAAACATTTTGGACTCTTCTTTCCCAACAAAACAAAGAAGTATCCATTTGGATTTGTTTAG 1047 0.4231 MVSLFARTKRFSLPTLVLLLELFTIYLRTADAQIGVCYGMMGDNLPPANEVVSLYKSNDIMRMRIYNPDQAALQALGNSGIELILGVLHQDLQGLATNASTAQQWVQSNVLNFWPSVKIKHVVVGNEINPVGSSSEFAQYVLPAIQNIYQAIRAQGLQDLIKVTTAIDMTLLGNSYPPSQSYFRTDVRSYLDPIIGYLVYANAPLLANVLPYFSYSNNPIDISLSYALFNSTNVVVWDGQYGYQNLFDAMLDAVHVAIDNTGIGYVEVVVSESGWPSDGGFAATYDNAHVYLENLILRAKRGSPRRPSKPTETYIFDMLDENLKSPEIEKHFGLFFPNKTKKYPFGFV* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0318 348 SUPERFAMILY (Trans)glycosidases 34 345 IPR017853 -
Gso9g0318 348 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 20 345 IPR044965 GO:0004553|GO:0005975
Gso9g0318 348 Pfam Glycosyl hydrolases family 17 34 345 IPR000490 GO:0004553|GO:0005975
Gso9g0318 348 ProSitePatterns Glycosyl hydrolases family 17 signature. 266 279 IPR000490 GO:0004553|GO:0005975
Gso9g0318 348 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 20 345 - -
Gso9g0318 348 Gene3D Glycosidases 33 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0318 Gso-Chr9 3050348 3052449 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0318 40 347 Glycoside Hydrolase AT4G16260 57.742 6.05e-131 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0318 - - ccaj:109791097 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1185 15 11722623 11724685 Gso9g0318 9 3050348 3052449 GST