Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1185 ATGCCTTCTCTCTTCGCTAGAAACCAGAGGTTCTCATTGGCTACTCTCCTGCTTCTTCTGGAACTATTGACAGGAAACCTTCGCATGGCAGATGCTCAAATTGGTGTGTGTTATGGCATGCTGGGCAACAATCTACCGTCAGCAAACGATGTTATAGGTCTTTATAGATCAAATAACATAAAGAGAATGAGACTCTATGATCCTAATCAAGCTGCTCTAGAAGCACTTAGAAATTCTGGCATTGAACTCATTCTTGGGGTGCCAAACTCTGACCTTCAAGGCCTTGCCACCAATCCTGACACTTCTCGTCAATGGGTGCAAAAAAACGTGTTGAACTTTTGGCCTAGTGTCAAAATCAAGTACGTGGCAGTTGGAAATGAAGTGAGTCCCGTTGGAGGCTCTTCTTCGGTAGCCCAATATGTTCTACCTGCCATCCAAAATGTATACCAAGCAATAAGAGCTCAAGGCCTTCATGATCAAATCAAGGTTTCAACATCTATTGACATGACCCTAATAGGAAACTCTTTCCCTCCATCGCAAGGTTCCTTCAGGGGTGATGTGAGATCATACCTAGATCCCATAATTGGGTACTTGGTATATGCAAATGCACCATTACTAGTCAATGTGTACCCTTATTTTAGTTACACTGGTAACCCCCGTGACATATCACTTCCCTATGCTCTTTTCACAGCACCAAATGTTGTGGTATGGGATGGTCAATATGGGTACCAAAATTTGTTTGATGCTATGTTGGATTCAGTACATGCAGCCATTGATAACACTAAGATTGGTTATGTGGAGGTTGTTGTATCCGAGAGTGGGTGGCCATCAGATGGAGGATTTGCTGCCACTTATGACAACGCACGCGTGTACTTAGACAATTTGGTTCGTCGTGCTAATAGAGGAAGCCCAAGAAGGCCTTCGAAGCCCACTGAGACTTATATATTTGCCATGTTCGATGAAAATCAAAAAAATCCAGAGATAGAGAAACATTTTGGGCTCTTCAATCCCAACAAACAAAAAAAATACCCATTTGGGTTTGGAGGAAAGAGGCTAGGGAAAGTTGTTATTGACGACTTCAATGCAACAACTTCCATTAAGAGTGATGTGTAA 1113 0.425 MPSLFARNQRFSLATLLLLLELLTGNLRMADAQIGVCYGMLGNNLPSANDVIGLYRSNNIKRMRLYDPNQAALEALRNSGIELILGVPNSDLQGLATNPDTSRQWVQKNVLNFWPSVKIKYVAVGNEVSPVGGSSSVAQYVLPAIQNVYQAIRAQGLHDQIKVSTSIDMTLIGNSFPPSQGSFRGDVRSYLDPIIGYLVYANAPLLVNVYPYFSYTGNPRDISLPYALFTAPNVVVWDGQYGYQNLFDAMLDSVHAAIDNTKIGYVEVVVSESGWPSDGGFAATYDNARVYLDNLVRRANRGSPRRPSKPTETYIFAMFDENQKNPEIEKHFGLFNPNKQKKYPFGFGGKRLGKVVIDDFNATTSIKSDV* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1185 370 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 22 354 - -
Gso15g1185 370 Gene3D Glycosidases 33 348 - -
Gso15g1185 370 SUPERFAMILY (Trans)glycosidases 34 346 IPR017853 -
Gso15g1185 370 Pfam Glycosyl hydrolases family 17 34 345 IPR000490 GO:0004553|GO:0005975
Gso15g1185 370 ProSitePatterns Glycosyl hydrolases family 17 signature. 266 279 IPR000490 GO:0004553|GO:0005975
Gso15g1185 370 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 22 354 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1185 Gso-Chr15 11722623 11724685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1185 40 356 Glycoside Hydrolase AT4G16260 64.263 1.95e-150 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g1185 - - gmx:100801599 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1185 15 11722623 11724685 Gso9g0318 9 3050348 3052449 GST