Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2733 ATGAAACCTCACAAACTTCCTTCTCCGTCGCTCTCACGTGCGCTCGCACGTGCCCTAAGCTCCGCCACCATCACCACGCATTGTGGACCGGCGTTTCCTTCGAAGACCGTTACCACTGCGAACTTCGAACCGTCGCTGGCGGAGCTCCGGCACCACGTCCGGTGTTCGGACTTCGTGGCCATCGACCTCGAGATGACCGGCGTGACGAGCGCTCCGTGGCGCGAGTCCTTGGCGTTCGACCGCTCCGACGTGCGGTACCTGAAGGTCCGTGACTCCGCCGCCAAGTTCGCCGTCGTTCAGTTCGGCGTTTGCCCCTTCCGTTGGGATCCCTCCAACCACTCCTTCGTTGCGCATCCGCACAATTTCTATGTTTTTCCTCGACAAGAGATTGCAGGTTTGGGTCCATGTGATGAATTTCTCTGCCAGACCACTTCAATGGATTTCTTGGCTAAATACCAGTTTGATTTTAATGCTTGCATACATGAAGGAATATCTTATTTATCCAGAGAACAAGAAAGGGAAGCATTAAGGAGTTTGAATTCTACATATGATAATAGTGAGTGGTCAGACATTGGTAAATTAAAAAATGTTAGGGACATACCACTGCTCAGCACGGCGGACATTTTGTTCACTGCAAGAATGAAAAATAAATTCGGTGAATGGCGTGATGGGTTATTTCAGGAGCAAAATCAAGAAGACCAAATTCAAGGAATTTCAAAAGACTCAAAATTTCAAGTGACTTTTTTTGAGATGCATCCAGCTCTTAGGCTTAATGGATTCACGTCTCACCAGCTTAAATTGATTCAGTTGGTAATCAGAAAACACTTCAAAGATCTATCATATGTCAGTGTGAACAGTGAGACTTCTGGTTCACAACAATTAGTTGTATATACAGACTCAAAGGATGAATTAAACTTACTTCTGAAGAAGGTGAAAGAAGAAAATCACAGGGCAGAAGAGAAGAAGATCCAAGCTGCCGTGGGATTTCGCCATGTTATTGATCTCCTTTCATCAGAACAGAAGTTGATAGTTGGTTACAATTGTTTTTTAGATATTGCTCATGTCTACAGCAAATTTATTGGCCCTCTTCCGGGGAGTCCTGATGAGTTTGTCGCCTCTGTTAACAAGTGCTTTCCACACATTGTTGACACCATTATACTCCTGAACACTAATTTGATGTTCCAAGAAAAGATGAAAAGGTCCAGAAAATCACTGGCCTCTGCATTCACTTTATTTTGTCCACAAATTGCGGCTGGCTCCAGAAGCACTGATCTAGGTTCACTGTCACATGTGAAAGTGGATGTTGAGGTTGATGGTTCGAGATCATGCAGCTGGAACCCTGGAGGCAAGCATGAGGCAGGATATGATGCCTTCATGACTGGATGCATCTTTGCCCAGTTATGCAGTGATTTAGGTATTGATTTTAAACTCCGTGATTCTTCAAACCAATTAGCCCTCAATGAGAAACTGCAGAAGTACGTTAATCGTCTATATCTTAGTTGGATACACGGGGACATCATTGATCTAAATACTGGTAATAAGGTTGCAGATTCTTCACCCAGTCATAGCCTGAAGAAGCGGTACCCAACAATTTTGTTTGAGAACATTGTTATTATTTGGGGATTTCCTTCTAAGCTGAAGGCAAATGAAGTAAGAGAGTGCATATCTAAAGTATTTGGACCAACTTCTGTAGTTTCTGTCTTCCACTTGGATGCAACTGCAGCATTCGTTCAGTTTAGCAAAACTGAATTAGTTTCTGATTTTCTATTAGTGAAGGATTCCTTAGAGAGAAGTGATGGTGCAATCTCGGTTTTGCATCCACTGTCAAAACTTTTGGAAGGTGGAAATACATGTGCTGCCAATTATGATACTTACAACGAAATATGTGGTTCACCCTTATCAGAAGGTCTGTTTGCTGATCAGGCAAAGAAAGTTGGTATAAAGTGGAAGACCAAATTAACAGAATGCAAGGTAGCATCCAGGGGTGAAGAACATGAAAATCCAAGTTTACAAGCTAATGATGTAAATACAGCTATGAAGAATGTAGAAAAGACCAAGCCAAACACAATTGATCAGTTAGGAAATGCTTCATCTCGTGGACAAGTCTCAACTTTTGAAATTGAAGATTCTTCTCGTGTTGCAGAAGCCAACTTGTGA 2157 0.4288 MKPHKLPSPSLSRALARALSSATITTHCGPAFPSKTVTTANFEPSLAELRHHVRCSDFVAIDLEMTGVTSAPWRESLAFDRSDVRYLKVRDSAAKFAVVQFGVCPFRWDPSNHSFVAHPHNFYVFPRQEIAGLGPCDEFLCQTTSMDFLAKYQFDFNACIHEGISYLSREQEREALRSLNSTYDNSEWSDIGKLKNVRDIPLLSTADILFTARMKNKFGEWRDGLFQEQNQEDQIQGISKDSKFQVTFFEMHPALRLNGFTSHQLKLIQLVIRKHFKDLSYVSVNSETSGSQQLVVYTDSKDELNLLLKKVKEENHRAEEKKIQAAVGFRHVIDLLSSEQKLIVGYNCFLDIAHVYSKFIGPLPGSPDEFVASVNKCFPHIVDTIILLNTNLMFQEKMKRSRKSLASAFTLFCPQIAAGSRSTDLGSLSHVKVDVEVDGSRSCSWNPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLRDSSNQLALNEKLQKYVNRLYLSWIHGDIIDLNTGNKVADSSPSHSLKKRYPTILFENIVIIWGFPSKLKANEVRECISKVFGPTSVVSVFHLDATAAFVQFSKTELVSDFLLVKDSLERSDGAISVLHPLSKLLEGGNTCAANYDTYNEICGSPLSEGLFADQAKKVGIKWKTKLTECKVASRGEEHENPSLQANDVNTAMKNVEKTKPNTIDQLGNASSRGQVSTFEIEDSSRVAEANL* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2733 718 MobiDBLite consensus disorder prediction 686 710 - -
Gso8g2733 718 Gene3D - 36 195 IPR036397 GO:0003676
Gso8g2733 718 Pfam CAF1 family ribonuclease 37 464 IPR006941 -
Gso8g2733 718 PANTHER POLY(A)-SPECIFIC RIBONUCLEASE PNLDC1 33 653 - -
Gso8g2733 718 Gene3D - 295 513 IPR036397 GO:0003676
Gso8g2733 718 SUPERFAMILY Ribonuclease H-like 36 475 IPR012337 -
Gso8g2733 718 MobiDBLite consensus disorder prediction 686 718 - -
Gso8g2733 718 PANTHER POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 33 653 - -
Gso8g2733 718 Coils Coil 301 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2733 Gso-Chr8 45038020 45044438 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2733 K01148 - gmx:100784997 1411.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2733 8 45038020 45044438 Gso8g2733 8 45038020 45044438 ECH
Gso18g0648 18 7145440 7151717 Gso8g2733 8 45038020 45044438 GST