Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0648 ATGATATTGCGGTCTAAATCATGTGTTGAAGATGAATTCCGCCAATGTATGAGATTCATAGTTGAAAAAAATAAGGATTCACCCCCCCACTTTACTTGCTACCGTACTGAGCAAAAGTCACTTCTACAAAGGCACAATTTCTATGTTTTTCCTCGACAGGAGCTCGCTGGCTTGGGTCCATGTGATGAATTCCTCTGCCAGACCACATCAATGGATTTCTTGGCTAAATACCAGTTTGATTTTAATGCTTGCATACATGAAGGAATATCTTATTTATCCAGAGAACAAGAAAGGAAAGCATTAAGGAGTTTGAATTCTACATATGATAGTGAGTGGTCAGACATTGGTAAATTAAAAGATGTTAGGGATATACCATTGCTCAGCGCGGCCGACATTTTGTTCACTGCACGGATGAAAAATAAATTCAGTGAATGGCGTGATGGGTTATTTCAGGAGCAAAATCAAGAAGACCAAATTCAAGGAATTTCAAAAGACTCAAAATTTCAAGTGACTTTTTTTGAGATGCATCCAGCTCTTAGGCTTAATGGATTCACATCTCACCAGCTTAAATTGATTCAGTTGCTCATCAGAAAACACTTCAAAGATCTTTCATATGTCAGTGTGAACAGTGAGGCTTCTGGTTCACAACAATTAGTCGTATATACAGACTTAAAGGATGAATTAAACTTACTTCTGAAGAAGGTAAAAGAAGAAAATCACAGGGCAGAAGAGATGAAGATCCAAGCTGCCGTTGGATTTCGCCATGTTATTGATCTCCTTTCATCAGAACAGAAGTTGATAGTTGGATACAATTGTTTTTTAGATATTGCTCATGTCTACAGCAAATTTATAGGCCCTCTTCCGGGGACTCCTGAAGAGTTTGTTGCCTCTGTTAACAAGTGCTTTCCTCACATTGTTGACACCAAGATACTCCTGAGCACTAATTTGATGTTCCAAGAAAAGATGAAAAGGTCCAGAAAATCCCTGGCCTCTGCATTCACTTCATTTTGTCCACAAATTGCAGCTGGCTCCAGAAGCACAGATCTAGGTTCACTCTCTCATGTGAAAGTGAACGTTGAGGTTGATGATTCAAGATCATGCAGCTGGAGCCCTGGAGGCAAGCATGAGGCAGGATATGATGCCTTCATGACTGGATGCATCTTTGCCCAGTTATGCAGTGATTTAGGTATTGATTTTAAACTCCATGATTCTTCAAAACAATTAGCCCTCAATGAGAAACTGCAGAAGTACGTTAATCGTCTATATCTTAGTTGGATGCAAAGGGACATTATTGATCTAAATACTGGTAATAAGGTTGCAGATTCTTCACTCAGCCATAGCCTGACGAAGCGGTACCCAAAAATTATGTTTGAGAACATTGTTATTATTTGGGGATTTTCTTCTAAGCTGAAGGCAAACGAAATAAGAGAGTGCATATCTAAAGTATTTGGGCCAACTTCTGTAGTTTCTGTCTTCCACTTGGATGCAACTGCAGCATTCGTCCAGTTTAGCAAAACTGAGTTAGTTTCTGATTTTCTTTTAGTGAAGGATTCCTTGGAGAGAAGTGGTGGTGCAATCTCGGTTTTGCATCCACTGTCAAAACTTTTGGAAGGTGGAAATACATGTGGTGCCAATTATGATACTTACAGAGAAATATGTGGTTCATCCTTATCAGAAGGTCTGTTCGCTGATCAGGCAGAGGCAGTTGGTATAAAGTGGAAGACCAAATTAACAGAATACAAGGTAGCATCGAGAGGCAAAGAACATGAAAATCCTAGTGTACAAGATAATGTAAATACGGCTATGAAGAATGTAGAAAGGGCCAAGCCAAACACAATTGATCAGTTAGGAAATGCTCCATCTTGTGGGCAAGTCTCAACTTTTGAGATTGAAGATTCTTCTTATGTTGCAGAAGCCAACTTGTGA 1926 0.3941 MILRSKSCVEDEFRQCMRFIVEKNKDSPPHFTCYRTEQKSLLQRHNFYVFPRQELAGLGPCDEFLCQTTSMDFLAKYQFDFNACIHEGISYLSREQERKALRSLNSTYDSEWSDIGKLKDVRDIPLLSAADILFTARMKNKFSEWRDGLFQEQNQEDQIQGISKDSKFQVTFFEMHPALRLNGFTSHQLKLIQLLIRKHFKDLSYVSVNSEASGSQQLVVYTDLKDELNLLLKKVKEENHRAEEMKIQAAVGFRHVIDLLSSEQKLIVGYNCFLDIAHVYSKFIGPLPGTPEEFVASVNKCFPHIVDTKILLSTNLMFQEKMKRSRKSLASAFTSFCPQIAAGSRSTDLGSLSHVKVNVEVDDSRSCSWSPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLHDSSKQLALNEKLQKYVNRLYLSWMQRDIIDLNTGNKVADSSLSHSLTKRYPKIMFENIVIIWGFSSKLKANEIRECISKVFGPTSVVSVFHLDATAAFVQFSKTELVSDFLLVKDSLERSGGAISVLHPLSKLLEGGNTCGANYDTYREICGSSLSEGLFADQAEAVGIKWKTKLTEYKVASRGKEHENPSVQDNVNTAMKNVERAKPNTIDQLGNAPSCGQVSTFEIEDSSYVAEANL* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0648 641 Gene3D - 21 125 IPR036397 GO:0003676
Gso18g0648 641 Gene3D - 224 437 IPR036397 GO:0003676
Gso18g0648 641 SUPERFAMILY Ribonuclease H-like 38 400 IPR012337 -
Gso18g0648 641 Pfam CAF1 family ribonuclease 33 388 IPR006941 -
Gso18g0648 641 PANTHER POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 44 577 - -
Gso18g0648 641 Coils Coil 221 248 - -
Gso18g0648 641 PANTHER POLY(A)-SPECIFIC RIBONUCLEASE PNLDC1 44 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0648 Gso-Chr18 7145440 7151717 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0648 K01148 - gmx:100808217 1147.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0648 18 7145440 7151717 Gso8g2733 8 45038020 45044438 GST