Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2731 ATGCCAGTCTCAGCTAGTCCAGCGCCACTGTTAGGGGATCGACTGTGTGAAAATGGATTTGAGTGTGTTAAAATTCTCCCTGCCACCAATGATGCACATGGAGGAGTCATTGTGGACTTAAAGGAGCCTTTGCACTCCGAAGTTTTTGCTACTTTGCTTAGATCTTCACTTTTACATTGGAAGCAACAGGGAAAAGATGGTGTTTGGATCAAGTTTCCTATTGAGCTTGTTAATCTTGTTGAAACTGCAGTTAAGGAGGGTTTTTGGTACCACCATGCAGAGCCAAACTATCTAATGCTAGTTTACTGGATTCCCAAAACTGACTGCACAATACCTCCAAATGCTTCTCATTGTGTAGCAGTTGGAGCTATTGTCTTGAACGATAATAAAGAGGTGCTTGTGGTTCTGGAAAAAAAAGGAGGATTTCATGGGATTGGTGTTTGGAAGATACCTACTGGAGTTGTTGATGCAGGTGAGGAGATTTTTGAGGCAGCTATTAGAGAAGTAAAAGAAGAGACAGGAATTGATACAGAATTTGTGGAATTACTAGCATTCAGACACACACACAATTCATTCTTTGGAAAATCGGGTCTATCTTTTATTTGCATGCTTCGCCCTCTTTCTTTTGACATCAAAAAGCAAGAACTGGAAATTGAGGCAGCTCAGTGGATGCCATTCGAGGAATTTGCTGATCAACCTTTTAATCAGATGCATGAACCCTTCAAGTACATGATTGAATTATGCTTGGCAAAGGTTGAAAAAGTCTATAATGGATTCTCTCCGCGACCCATCTCATCATATTTCGTGGAGGAGTTGAATTATCTATATTTGAATAGTCATTGCCTGGACAAGTCTTCTTAA 861 0.4042 MPVSASPAPLLGDRLCENGFECVKILPATNDAHGGVIVDLKEPLHSEVFATLLRSSLLHWKQQGKDGVWIKFPIELVNLVETAVKEGFWYHHAEPNYLMLVYWIPKTDCTIPPNASHCVAVGAIVLNDNKEVLVVLEKKGGFHGIGVWKIPTGVVDAGEEIFEAAIREVKEETGIDTEFVELLAFRHTHNSFFGKSGLSFICMLRPLSFDIKKQELEIEAAQWMPFEEFADQPFNQMHEPFKYMIELCLAKVEKVYNGFSPRPISSYFVEELNYLYLNSHCLDKSS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2731 286 CDD Nudix_Hydrolase_12 117 248 - -
Gso8g2731 286 SUPERFAMILY Nudix 84 246 IPR015797 -
Gso8g2731 286 Pfam Nudix hydrolase domain 26 104 IPR040618 -
Gso8g2731 286 Gene3D - 15 108 - -
Gso8g2731 286 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 118 258 - -
Gso8g2731 286 Pfam NUDIX domain 119 240 IPR000086 -
Gso8g2731 286 PANTHER NUDIX HYDROLASE RELATED 20 285 IPR003293 -
Gso8g2731 286 PANTHER NUDIX HYDROLASE 2 20 285 - -
Gso8g2731 286 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 76 94 IPR003293 -
Gso8g2731 286 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 114 132 IPR003293 -
Gso8g2731 286 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 202 226 IPR003293 -
Gso8g2731 286 ProSitePatterns Nudix box signature. 153 174 IPR020084 GO:0016787
Gso8g2731 286 ProSiteProfiles Nudix hydrolase domain profile. 116 248 IPR000086 -
Gso8g2731 286 PRINTS NUDIX hydrolase family signature 148 162 IPR020476 -
Gso8g2731 286 PRINTS NUDIX hydrolase family signature 162 177 IPR020476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2731 Gso-Chr8 44996014 45000391 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2731 - - gmx:100783941 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2731 8 44996014 45000391 Gso8g2731 8 44996014 45000391 ECH
Gso18g0651 18 7215331 7220173 Gso8g2731 8 44996014 45000391 GST