Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0651 ATGGATTTAAGTGTTAAAATTCTCCCTGCCACCAATGATGTACATGGAGGAGTCATTGTGGACTTAAAGGAGCCTATGGACTCTGAAGATTTTGCTACTTTGCTTAGATCTTCACTTTTACATTGGAAGCAACAGGGAAAAGATGGTGTTTGGATCAAGCTACCTATTGAGCTTGTTAATCTTGCTGAAACTGCAGTTAAGGAGGGTTTTTGGTACCACCATGCAGAGCCAAACTATCTAATGCTAGTTTACTGGATTCCAAAAACTGGCTGCACAATACCTCCAAATGCTTCCCATCGTGTAGCAGTTGGCGCAATTGTCCTGAATGATAAGAAAGAGGTTCTTGTGGTCAAGGAAAAGAGAGGTGGATTTCATGGGATTGGTGTTTGGAAGATACCTACTGGATTAGTTGATGCAGGTGAGGAGATTTTTGAAGCAGCTATTAGAGAAGTTAAAGAAGAGACAGGAATTGACACAGAATTTGTGGAAGTACTAGCATTCAGACACACACACAATTCATTCTTTGGAAAATCAGATATATCTTTTATTTGCATGCTGTGTCCTCTTTCTTTTGACATCAAAAAGCAAGAACTGGAAATTGAGGCAGCTCAGTGGATGCCGTTCAAGGAATTTGCTGATCAACCTTTTAATCAGATGCATGAACCCTTCAAGTACATGATTGAATTATGCTTGGCAAAGGTTGAAAAAGTCTATAATGGATTCTCTCCGCGACCTGTCTCGTCGTATTTCGTGGAGGAGTTGAATTATCTATATTTGAATAGCCATGGCCTGGACAAATCTTCTTAA 807 0.399 MDLSVKILPATNDVHGGVIVDLKEPMDSEDFATLLRSSLLHWKQQGKDGVWIKLPIELVNLAETAVKEGFWYHHAEPNYLMLVYWIPKTGCTIPPNASHRVAVGAIVLNDKKEVLVVKEKRGGFHGIGVWKIPTGLVDAGEEIFEAAIREVKEETGIDTEFVEVLAFRHTHNSFFGKSDISFICMLCPLSFDIKKQELEIEAAQWMPFKEFADQPFNQMHEPFKYMIELCLAKVEKVYNGFSPRPVSSYFVEELNYLYLNSHGLDKSS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0651 268 ProSiteProfiles Nudix hydrolase domain profile. 98 230 IPR000086 -
Gso18g0651 268 Pfam Nudix hydrolase domain 8 86 IPR040618 -
Gso18g0651 268 CDD Nudix_Hydrolase_12 99 230 - -
Gso18g0651 268 Pfam NUDIX domain 99 222 IPR000086 -
Gso18g0651 268 PANTHER NUDIX HYDROLASE RELATED 5 267 IPR003293 -
Gso18g0651 268 SUPERFAMILY Nudix 66 228 IPR015797 -
Gso18g0651 268 PANTHER NUDIX HYDROLASE 2 5 267 - -
Gso18g0651 268 Gene3D - 5 90 - -
Gso18g0651 268 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 58 76 IPR003293 -
Gso18g0651 268 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 96 114 IPR003293 -
Gso18g0651 268 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 156 179 IPR003293 -
Gso18g0651 268 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 184 208 IPR003293 -
Gso18g0651 268 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 100 240 - -
Gso18g0651 268 PRINTS NUDIX hydrolase family signature 130 144 IPR020476 -
Gso18g0651 268 PRINTS NUDIX hydrolase family signature 144 159 IPR020476 -
Gso18g0651 268 ProSitePatterns Nudix box signature. 135 156 IPR020084 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0651 Gso-Chr18 7215331 7220173 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0651 - - gmx:100810351 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0651 18 7215331 7220173 Gso8g2731 8 44996014 45000391 GST