Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2690 ATGGATTCCCCACAATCTGTTGTGTCACCCTTCAGGAGCTCAGTGTTGGGTGAGGGTGAGAAGCACAAGTCTGATGTTTTCTCAGGAAACTCTAGTCCTTTGTCCAAGGACATTGAAGTGAATGGCAAGGAAGTAGTCATGTCAAATGTAGAGGAGTTTCTTGGAGTGCTTGATGTTTACATACATCAAGCCAGGGACATTCAAAACATTTGCATATACCACAAGCAAGATGTTTATGCTAAGATTAGTCTGACCAGTAATCCTGAGACCACCATGTCTACCAAAACCATCAATGGAGGAGGAAGGAACCCTGTTTTCAACGAGAATCTTCGTATTGATGTTAGGACTGTTGATGCATCTCTCAAGTGTGAGATATGGATGCTTAGCAGGGTGAAGAACTACCTTGAAGACCAGTTGCTTGGTTTTGCTTTGGTACCCTTGTCTGAAGTACTGGTCCAGAATGGGAAACTTGAGAAAGAGTTCTCTCTTTCTTCAACTGATCTATTCCATTCTCCTTCAGGTTTTGTTCAGTTGTCGCTTTCCTACACTGGTGCTTCACCTGATGTTATGGCAATTTCTGCAATGCCAAACAAGGTGGCCACAGATGGTACCGTGCAGGACTCAGATACGTCCGAGTCACTGGCCCGGGATTTAGACAAAATCGAGTTCCCAGATCCAAAGATTGTGAATGAAGACCACTTGATGGTTTCAGAATACTTCGGCATTCGGTGTGAGGAGACTCAGTGTTCTGATAGCTTGGCTACTTCTGATGCTGAAAATCACAGTTCCGAAGCCGGTGTTCAGCTTGTGGAAAGCTTCTCAGCATGCAGTGTTGAGTCTGTTCAGCCAACTAAGGTCGATTCCCCCCCTAGCAGTGTGTCGACAAATGGGGTTTCTTCCCCTTCTGTGCCAGCAAACTCAGAATCATCTGATGCTGCTGCTGCTGCTTCTAAGTCTCCCATTCAGGAGCAAGTTTCAGGCACCAAAGAGGACAAAAATGTGGATGCCAAAGATGGTGAGAGTGATTCCTCATGTGGGGTTCCTATTGATTCATTCCCTAAGCCTGTTGTGAGTGTGAACATTGAGCCTGAGCCAAAGGTTGTGCAGCAGGATATAGTAGACATGTACATGAAAAGCATGCAGCAATTCACTGAGTCGCTAGCAAAAATGAAGCTTCCGATGGACTTGGAAAGTGAACCAACCAGTTCAGGAAATTCAACCACTGAGCAGAAACTACAGCCATCAAAGAGCAATAATTCCCGCGTGTTTTATGGCAGCAGAGCTTTCTTCTGA 1293 0.4532 MDSPQSVVSPFRSSVLGEGEKHKSDVFSGNSSPLSKDIEVNGKEVVMSNVEEFLGVLDVYIHQARDIQNICIYHKQDVYAKISLTSNPETTMSTKTINGGGRNPVFNENLRIDVRTVDASLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVQNGKLEKEFSLSSTDLFHSPSGFVQLSLSYTGASPDVMAISAMPNKVATDGTVQDSDTSESLARDLDKIEFPDPKIVNEDHLMVSEYFGIRCEETQCSDSLATSDAENHSSEAGVQLVESFSACSVESVQPTKVDSPPSSVSTNGVSSPSVPANSESSDAAAAASKSPIQEQVSGTKEDKNVDAKDGESDSSCGVPIDSFPKPVVSVNIEPEPKVVQQDIVDMYMKSMQQFTESLAKMKLPMDLESEPTSSGNSTTEQKLQPSKSNNSRVFYGSRAFF* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2690 430 MobiDBLite consensus disorder prediction 281 356 - -
Gso8g2690 430 MobiDBLite consensus disorder prediction 398 424 - -
Gso8g2690 430 SMART C2_3c 56 159 IPR000008 -
Gso8g2690 430 Pfam C2 domain 55 162 IPR000008 -
Gso8g2690 430 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 430 - -
Gso8g2690 430 CDD C2 57 163 - -
Gso8g2690 430 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 185 IPR035892 -
Gso8g2690 430 MobiDBLite consensus disorder prediction 392 430 - -
Gso8g2690 430 ProSiteProfiles C2 domain profile. 30 161 IPR000008 -
Gso8g2690 430 PANTHER EXPRESSED PROTEIN 1 430 - -
Gso8g2690 430 MobiDBLite consensus disorder prediction 281 327 - -
Gso8g2690 430 Gene3D C2 domain 51 208 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2690 Gso-Chr8 44554602 44557249 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2690 - - gmx:100804602 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2690 8 44554602 44557249 Gso8g2690 8 44554602 44557249 ECH
Gso18g0694 18 7906182 7908826 Gso8g2690 8 44554602 44557249 GST
Gso8g2690 8 44554602 44557249 Gso14g0142 14 1247597 1250298 PCT
Gso8g2690 8 44554602 44557249 Gso2g2522 2 49613152 49615743 PCT
Gso14g0142 14 1247597 1250298 Gso8g2690 8 44554602 44557249 PCT
Gso2g2522 2 49613152 49615743 Gso8g2690 8 44554602 44557249 PCT