Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0142 ATGGAATCCCCACAATCCGTTGTGTCACCATTCAAGAGCTCTGTCTTGGGTGAAGCTGAGAAGTATAGGTCTGATGTTTTCACACAAAGCTCGGGTCCTTTGTCTAAGGACATTGAAGTCAATGGAAAGGAAGCTGCCGTGGTTAATCCAGAGGAATCCATCGGTGTTGTTGATGTTTACATTCATCAGGCTAGGGACATTCATAACATCTGCATATACCACAAGCAAGATGTTTATGCTAAGATTTGCTTGACTAGTAATCCTGAGAATTCTGTCTCTACCAAGACTATCAATGGAGGAGGAAGGAACCCCGTGTTTAATGAGAATCTTCGTCTAAGTGTTAGGACTGTTGATTCTGCTGTCAAATGTGAAATTTGGATGCTGAGCAGGGTGAAGAATTATCTGGAAGATCAGTTGCTTGGTTTTGCTTTGGTGCCTTTGTCTGAAGTACTGGTGAAGGATGGAAAACTAGAGAAAGAGTTCTCTCTTTCTTCAACTGATTTATTCCATTCCCCGGCTGGTTTTGTTCAATTGTCTCTTGCTTACACCGGTGCTTCACCTGATGTTATGGCGATTTCTGCAATGCCTACTGAGTTGGCCACAAATGGCACCGAGAAGGACTCAGAATCATGCGAGTCACTGGCCAGAGATTTGGACAAAATTGAATTCCCAGATCCAAAAATTGTAAATGAAGACCACTGGATGGTTTCGGAATACTTTGGCATTCCATGTGAGGAGAGCCAGTGTTCTGATAGCTTGACCACTACTGATACTGAAAATCTTAGTTCTGAAGCAGGTGTTCAGATTGTGGAGAGCTTCTCAGCATGCAGTGTTGAATCTGTCCAACCTCCTAAGGCTGATTCTCCACCCAGCAGTGTGTCAACAAATGGGGTTTCATCTCCTTCAGTGGCTGCAAGCTCAGACTCATCTGATGTTGCTGCTTCCAAGTCTCCCAGTCAGGAACAAGTTTCAGCCACCAAAGAGAAAAATGGGGATGTCAAAGATGGTGGGAGTGATTCCTCAAATGGGGTGCTGAATGAGTCATTCCCTAAGCCTGTTGTGACTGTTAACATCGAGCCGGAGCCGAATGTGGTGCAGCAGGATTTTGTAGACATGTACATGAAAAGCATGCAGCAATTCACCGAGTCATTGGCGAAAATGAAGCTTCCTATGGACTTTGAAAGTGGACCAACTAGTTCAGGAAACTCTAGCTCTGAACAGAAGATACAGACACCAAAGAGCACTAACTCCCGTGTGTTTTATGGAAGCAGGGCTTTCTTCTGA 1284 0.4447 MESPQSVVSPFKSSVLGEAEKYRSDVFTQSSGPLSKDIEVNGKEAAVVNPEESIGVVDVYIHQARDIHNICIYHKQDVYAKICLTSNPENSVSTKTINGGGRNPVFNENLRLSVRTVDSAVKCEIWMLSRVKNYLEDQLLGFALVPLSEVLVKDGKLEKEFSLSSTDLFHSPAGFVQLSLAYTGASPDVMAISAMPTELATNGTEKDSESCESLARDLDKIEFPDPKIVNEDHWMVSEYFGIPCEESQCSDSLTTTDTENLSSEAGVQIVESFSACSVESVQPPKADSPPSSVSTNGVSSPSVAASSDSSDVAASKSPSQEQVSATKEKNGDVKDGGSDSSNGVLNESFPKPVVTVNIEPEPNVVQQDFVDMYMKSMQQFTESLAKMKLPMDFESGPTSSGNSSSEQKIQTPKSTNSRVFYGSRAFF* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0142 427 Pfam C2 domain 56 161 IPR000008 -
Gso14g0142 427 ProSiteProfiles C2 domain profile. 30 161 IPR000008 -
Gso14g0142 427 MobiDBLite consensus disorder prediction 395 417 - -
Gso14g0142 427 CDD C2 57 163 - -
Gso14g0142 427 MobiDBLite consensus disorder prediction 280 326 - -
Gso14g0142 427 MobiDBLite consensus disorder prediction 280 348 - -
Gso14g0142 427 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 427 - -
Gso14g0142 427 SMART C2_3c 56 159 IPR000008 -
Gso14g0142 427 Gene3D C2 domain 50 208 IPR035892 -
Gso14g0142 427 MobiDBLite consensus disorder prediction 391 417 - -
Gso14g0142 427 PANTHER EXPRESSED PROTEIN 1 427 - -
Gso14g0142 427 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 50 184 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0142 Gso-Chr14 1247597 1250298 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0142 - - gmx:100781587 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0142 14 1247597 1250298 Gso2g2522 2 49613152 49615743 GST
Gso18g0694 18 7906182 7908826 Gso14g0142 14 1247597 1250298 PCT
Gso8g2690 8 44554602 44557249 Gso14g0142 14 1247597 1250298 PCT
Gso14g0142 14 1247597 1250298 Gso18g0694 18 7906182 7908826 PCT
Gso14g0142 14 1247597 1250298 Gso8g2690 8 44554602 44557249 PCT