Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2666 ATGGGAGACAATGTTGTAGTGTCCAATATGGAGCTAGAGAGGTTGCTTAGCATGAAAGGAGGCAAAGGTGAGGGAAGCTATGCCAACAATTCCCAAGCACAGGCCATACATGCCAAGTCCATGCATCACCTTCTCAAAGAAGCCCTAGATGGAGTTCAACTTCAGGCCCCTAACATACCATTTGTGGTTGTGGATTTGGGGTGTTCATGTGGCATCAACACCATCAATGTGGTGGATTTGATCATCAAGCACATCATCAAACGCTATGAGGCCTTAGGATTAGACCCACCTGAGTTTTCAGCTTTCTTCTCTGACCTTCCTAGCAACGACTTCAACACCCTCTTTCAGCTCCTTCCTCCCTTGGCCAACTATGGAGTTAGCATGGAAGAGTGCCTTGCCGCCAATAACCACCGCTCCTACTTCGCTGCCGGGGTCCCCGGCTCCTTCTACCGGAGACTTTTTCCGGCAAGGTTCATTGATGTTTTTCACTCGGCCTTTTCCTTGCATTGGTTATCTCAGGTGCCAGAATCTGTTTTGGACAAGAGGTCAAGTGCACACAACAAGGGCAGGGTGTTTATCCATGGTGCTAGTGAGATCACTGCAAATGCTTACAAAAAACAATTCCAAACAGACCTAGCAACCTTCTTGAGCTCAAGGGCTGTGGAATTGAAGAGAGGGGGGTCCATGTTCTTGGTTTGCTTAGGCAGAACTTCTGTGGACCCCACAGACCAGGGTGGGGCTGGCCTCCTCTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGATTAATTAGCGGTGAGAAAAGAGACAGTTTCAACATTCCAGTGTATGCACCAAGCCTGCAAGACTTCAGGGAGGTGGTTGAAGCCGATGGTTCATTTGCCATAAACAAGCTTGAGGTTTTCAAAGGTGGAAGTCCTCTTGTAGTGAACCAGCCAGATGATGATGGTGAAGTTGGGAGGGCCCTTGCGAACAGCTGCAGGAGTGTTTCTGGTGTCCTTGTTGATGCTCACATTGGTGACAAGCTTAGTGAAGAACTGTTTATGAGAGTGGAACGTAGAGCCACAAGCCATGGCAAAGAGTTATTAGAGCAACTACAGTTCTTTCACATAGTTGCATCCCTTTCTTTTGCTCTATGA 1152 0.4809 MGDNVVVSNMELERLLSMKGGKGEGSYANNSQAQAIHAKSMHHLLKEALDGVQLQAPNIPFVVVDLGCSCGINTINVVDLIIKHIIKRYEALGLDPPEFSAFFSDLPSNDFNTLFQLLPPLANYGVSMEECLAANNHRSYFAAGVPGSFYRRLFPARFIDVFHSAFSLHWLSQVPESVLDKRSSAHNKGRVFIHGASEITANAYKKQFQTDLATFLSSRAVELKRGGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLISGEKRDSFNIPVYAPSLQDFREVVEADGSFAINKLEVFKGGSPLVVNQPDDDGEVGRALANSCRSVSGVLVDAHIGDKLSEELFMRVERRATSHGKELLEQLQFFHIVASLSFAL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2666 383 Gene3D - 16 362 IPR042086 -
Gso8g2666 383 Gene3D Vaccinia Virus protein VP39 30 309 IPR029063 -
Gso8g2666 383 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 381 IPR005299 GO:0008168
Gso8g2666 383 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 8 381 - -
Gso8g2666 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 380 IPR029063 -
Gso8g2666 383 Pfam SAM dependent carboxyl methyltransferase 59 379 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2666 Gso-Chr8 44335624 44340458 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2666 K18848 - gmx:100801476 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2666 8 44335624 44340458 Gso8g2666 8 44335624 44340458 ECH
Gso18g0739 18 8821278 8825710 Gso8g2666 8 44335624 44340458 GST
Gso8g2666 8 44335624 44340458 Gso14g0155 14 1350227 1354762 PCT
Gso8g2666 8 44335624 44340458 Gso2g2508 2 49489436 49494030 PCT
Gso14g0155 14 1350227 1354762 Gso8g2666 8 44335624 44340458 PCT
Gso2g2508 2 49489436 49494030 Gso8g2666 8 44335624 44340458 PCT