Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2508 ATGGCTCCGATGGGAAACAATGTTGTTGTGTCCAATATGAAACTGGAGAAGTTGCTTAGCATGAAAGGAGGCAAAGGAGAAGCCAGCTATGCCAAAAATTCCCAAGCACAGGCCATACATGCGAGGTCCATGCTTCATCTTCTGAGAGAGACACTAGACAGAGTTGAGGTTGTTGAGGCACGTGATGGGGTGGCATTTGTGGTGGCGGACTTGGGGTGTTCGTGTGGGAGCAACAGCATAAACGTGGTGGATGTGATAATAAAGCACATGATGAAAAGGTACCAGGCATTGGGGTGGCAGCCACCAGAGTTCTCGGCTTTCTTCTCAGACCTTCCCAGCAATGACTTCAACACACTCTTCCAGCTCCTTCCTCCGCTCGCCAACTACGGCGCCGTCAACATGGAGGAATGCCTTGCTGCCAACAACCACCGCTCCTACTTCGCCGCCGGAGTTCCCGGTTCCTTCTACCGGAGGCTTTTTCCGGCAAGGTCCGTTCATGTTTTCCACTCAACCTTCTCTTTGCACTGGCTATCTCAGGTGCCAGAATGTGTAGTGGATAAGAGGTCAAGTGCATATAACAAAGGAAGGGTGTTTATCCATGGGGCTGGTCAGAGCACGGCAAATGCCTACAAGAAACAATTCCAAACAGACTTGGCAGGCTTTCTGAGAGCAAGGTCAGTGGAGATGAAGAGAGAGGGGTCCATGTTCTTAGTTTGCTTGGCCAGAACTTCAGTGGACCCCACAGACCAAGGTGGGGCTGGCCTTCTTGTTGGGACCCATTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGATTGATTAGCCAAGAAAAGCGAGATACTTTTAACATTCCAGTCTATGCAGCAAGCCTGCAAGACTTCAAGGAGGTGGTTGAAGCTAATGGTTCATTTACCATAGACAAGCTTGAGGTATTCAAAGGAGGAAGTCCACTTGTGGTCAACCAACCAGATGATGCAAGTGAGGTAGGCAGGGCTCTAGCCAACAGCTGCAGGACAGTGTGTGGAGTCCTTGTTGATGCCCACATTGGTGACAAACTAAGTGAGGAACTTTTTCTTAGAGTGGAGCATCGAGCCACTATGCATGCCAAAGAGCTATTAGAGCAACTACAGTTCTTTCACATAGTTGCATCCCTTTCTTTTGTTCAATGA 1170 0.4915 MAPMGNNVVVSNMKLEKLLSMKGGKGEASYAKNSQAQAIHARSMLHLLRETLDRVEVVEARDGVAFVVADLGCSCGSNSINVVDVIIKHMMKRYQALGWQPPEFSAFFSDLPSNDFNTLFQLLPPLANYGAVNMEECLAANNHRSYFAAGVPGSFYRRLFPARSVHVFHSTFSLHWLSQVPECVVDKRSSAYNKGRVFIHGAGQSTANAYKKQFQTDLAGFLRARSVEMKREGSMFLVCLARTSVDPTDQGGAGLLVGTHFQDAWDDLVQEGLISQEKRDTFNIPVYAASLQDFKEVVEANGSFTIDKLEVFKGGSPLVVNQPDDASEVGRALANSCRTVCGVLVDAHIGDKLSEELFLRVEHRATMHAKELLEQLQFFHIVASLSFVQ* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2508 389 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 10 387 IPR005299 GO:0008168
Gso2g2508 389 Gene3D - 19 370 IPR042086 -
Gso2g2508 389 Pfam SAM dependent carboxyl methyltransferase 65 385 IPR005299 GO:0008168
Gso2g2508 389 Gene3D Vaccinia Virus protein VP39 33 315 IPR029063 -
Gso2g2508 389 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 10 387 - -
Gso2g2508 389 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 386 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2508 Gso-Chr2 49489436 49494030 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2508 K18848 - gmx:100805902 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0155 14 1350227 1354762 Gso2g2508 2 49489436 49494030 GST
Gso18g0739 18 8821278 8825710 Gso2g2508 2 49489436 49494030 PCT
Gso8g2666 8 44335624 44340458 Gso2g2508 2 49489436 49494030 PCT
Gso2g2508 2 49489436 49494030 Gso18g0739 18 8821278 8825710 PCT
Gso2g2508 2 49489436 49494030 Gso8g2666 8 44335624 44340458 PCT