Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2612 ATGGATTGCAGAAACAGGGACTCAATCACAGAGAATCACACTTCATCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTGTGATTCACTCAGCGAAGCCTTGCTTTTCACCACCATGTGCATCGTTGGCCACCCCGTCGATGTTCACGTTAAGGATGGCTCTGTCTATTCCGGAATCTTCCACACTGCTTCTGTTCACGCCGATTACGGTATTGTTTTGAAGAAAGCAAGGATGACCAAGAAGGGAAAGGGCAACTCTAATGTCGGAAATGAGGGCTTCGTGGATACACTAGTGATTCTATCCAGTGATCTTGTGCAAGTTGTAGCTAAGGGAGTAATATTTCCTGCAGATGGTGTTGGTGGAAACATAACTGGTGATGATGAGGAAGCAGTTGCACATAATGTTTGTTCCGAGAGTCTAACATGTGAGGTAGAGAATCATACAGGACCTTTGATGGGTGCAAAACAGGTTAATCAATTAAGACAAGCTGGAGACGACAAGTCAAACTCAAAAGGGAAAACTGATGACTGTGGACAGAAGTCTGAGTCTGTTAATGAAAAAATTGATGAAAAGACTCAAAACCTCAATTCAAGCCATGAAACTGATACATGTCCAGGTCAAGAGGTAGCTGTTGAGCATGGAAGCACCGATAGGACATCAAGTCCTTCGGATAATGGATTACTCTGCAACAATGCCCCTGCATCTGTTAAGGCCAATGATCGGAATAGTGAAAGGTCTACTTCTGCAGACTCTGTCTCTAAAAATTTAACCCAAGGTGTGGATATCATCCAAGATTCACAGCCAGCAAGGTCCATTGAAATATCTGCTCCAAGGGGTACAGATTCTACCAGAAATGCTAAGGAATTTAAGCTCAATCCAGCTGCCAAAACCTTCTCTCCATCTTTTGTGAATCCTATATCAGCAACTTCTGCTGCAAACATGGTATACATACCAAATAGCTCTCCTCCAGTCTCTGTTACTATTCAACCTGAAGTTGGATTCAATACTTTTGCTTCTCGGCCATCAATGCCTGTTAAAGTTGCACAGTACAGTAATTTGACAGTGAGCAATGGTGGCAGTGGCTCTCAATTTTCACAGCCTATTGTTGGACATGTGGCACATAGAACCCAACCTCTACGGTATGCTACACATTACAGTCCAGTTTTGTCTGAACATGCTTATATGCAACCAAGCTCTCCTGCTGTTATGGTTGGACGTTCCCCCCAGTTAGTCTATGTTCAGCCAGTTTCCCATGATTTGATTCATGGAACAACAACTGTCCCACCAGTCTCAGCTCGCCCTCTGTTGAATCATGTACAATTTCCAAAGCAGCAGGGAGGAACAATTGGTCCAGCAATGCCAGTTTCTGTTCCCCCTCCTGTCCTAACAAGTGGACATCAGCCCTTTGCACTTCAAAGCCACATTCCCCTTCTGCAACCTGGCTTTCCTGTCACTCGACCTATTTCAGTCCCTGGACCAAATGGTTTCTATGGCACTAAGTATTAG 1518 0.4401 MDCRNRDSITENHTSSSSSSSSSSSSSSSSCDSLSEALLFTTMCIVGHPVDVHVKDGSVYSGIFHTASVHADYGIVLKKARMTKKGKGNSNVGNEGFVDTLVILSSDLVQVVAKGVIFPADGVGGNITGDDEEAVAHNVCSESLTCEVENHTGPLMGAKQVNQLRQAGDDKSNSKGKTDDCGQKSESVNEKIDEKTQNLNSSHETDTCPGQEVAVEHGSTDRTSSPSDNGLLCNNAPASVKANDRNSERSTSADSVSKNLTQGVDIIQDSQPARSIEISAPRGTDSTRNAKEFKLNPAAKTFSPSFVNPISATSAANMVYIPNSSPPVSVTIQPEVGFNTFASRPSMPVKVAQYSNLTVSNGGSGSQFSQPIVGHVAHRTQPLRYATHYSPVLSEHAYMQPSSPAVMVGRSPQLVYVQPVSHDLIHGTTTVPPVSARPLLNHVQFPKQQGGTIGPAMPVSVPPPVLTSGHQPFALQSHIPLLQPGFPVTRPISVPGPNGFYGTKY* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2612 505 MobiDBLite consensus disorder prediction 164 288 - -
Gso8g2612 505 PANTHER ATAXIN 2-RELATED 1 502 IPR045117 GO:0003723
Gso8g2612 505 MobiDBLite consensus disorder prediction 217 286 - -
Gso8g2612 505 PANTHER POLYADENYLATE-BINDING PROTEIN INTERACTING PROTEIN 1 502 - -
Gso8g2612 505 MobiDBLite consensus disorder prediction 170 200 - -
Gso8g2612 505 Pfam Ataxin 2 SM domain 36 114 IPR025852 -
Gso8g2612 505 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Gso8g2612 505 MobiDBLite consensus disorder prediction 10 29 - -
Gso8g2612 505 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2612 Gso-Chr8 43771417 43779877 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2612 - - gmx:100794683 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2612 8 43771417 43779877 Gso8g2612 8 43771417 43779877 ECH
Gso18g0810 18 10223919 10238765 Gso8g2612 8 43771417 43779877 GST