Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0810 ATGGGTTGCAGAAACAGGGACTCAATCACAGAGAATCACACTTCGTCATCATCATCTTCTTCTGATTCACTCAGTGAAGCCTTGCTTTTCACCACCATGTGCATCGTTGGCCACCCCGTCGATGTTCACGTTAAGGATGGCTCTGTCTATTCTGGAATCTTCCACACTGCTTCTGTTCACGCCGACTACGGTATTGTTTTGAAGAAAGCAAGGATGACCAAGAAGGGAAAGGGCAACAATAATGTCGGAAATGAGGGCTACGTGGATACATTAGTGATTCTATCCTGTGATCTTGTGCAAGTTGTAGCTAAGGGAGTAATGCTTCATGCAGATGTTGTTGGTGGAAACATAACTGGTGACGATGAGGAAGCAGTTGCGCATAATGTTTGTTCCGAGAGTCTAACGTGTGAGGTAGAGAATCATACAGGGCCTTTGATGGACACAAAACAGGTTAATCACTCAAGACAAGCCGGAGACGACAAGTCAAACTCAAACGGGAAAACTGATAACTGCGGAGAGAAGTCTGAGTTTGTTAATGAAAAAACTGATGAAAAGATTCAAAGCCTCAATTCAAGCCATGAAACCGATACATCGCTAGGCCAAGAGGTAGCTGTTGAGCATGGAAGTACAGATAGGACATCAATTCCTTCTGATAATGGATTACTCTGCAACAACACCCCTGCATCTGTTAAGGCCAGTGATCGGAATAGTGAAAGGTCTACTTCTGCAGACTCTGTCTCTACAAATTTAACCCAAGGTGTGGATCTCATCCAAGATTCACAGCCAGCAAGATCCAATGAAATATCTGTTCCAAGGGGTACAGGTTCTACTAGAAATGCTAAGGAATTTAAGCTCAATCCAGCTGCCAAAACCTTCTCTCCATCTTTTGTGAATCCCATGCCAGCAACTTCGGCTGCAAACATGGTATACATACCAAATAGCTCTCCTCCAGTACCTGTTACTATTCAACCTGAAGTTGGATTCAATACTTTTGCTTCTCGGCCATCAATGCCTGTTAAGGTTTCACAGTATAGTAATTTGACGGTGGGAAATGGTGGCAGTGGCTCTCAATTTTCGCAACCTATTGTTGGACATGTGGCGCATAGAGCCCAACCTCTACGATATGCTACACATTACAGTCCTGTTTTGTCTGAACCTGCTTATATGCAACCAAGCTCTCCTGCTGTTATGGTTGGACGTTCCCCCCAGTTAGTCTATGTTCAGCCAGTTTCCCATGATTTGATTCATGGAACGACGGCTGTCCCACCAGTCTCAGCTCGCCCTCTGATGAATCATGTACAATTTCCAAAGCAGCAGGGAGGAACAATTGGTCCAGCAATGCCGGTTTGTGTGCCCCCTCCTGTCTTAACAAGTGGACATCAGCCCTTTACACTTCAAAGCCACATTCCTCTTCTGCAACCTGGCTTTCCTGTCTCTCGACCTATTTCCGTCCCAGGACCAAATGGTTTCTATGGCACCAAGTTTTAG 1488 0.4516 MGCRNRDSITENHTSSSSSSSDSLSEALLFTTMCIVGHPVDVHVKDGSVYSGIFHTASVHADYGIVLKKARMTKKGKGNNNVGNEGYVDTLVILSCDLVQVVAKGVMLHADVVGGNITGDDEEAVAHNVCSESLTCEVENHTGPLMDTKQVNHSRQAGDDKSNSNGKTDNCGEKSEFVNEKTDEKIQSLNSSHETDTSLGQEVAVEHGSTDRTSIPSDNGLLCNNTPASVKASDRNSERSTSADSVSTNLTQGVDLIQDSQPARSNEISVPRGTGSTRNAKEFKLNPAAKTFSPSFVNPMPATSAANMVYIPNSSPPVPVTIQPEVGFNTFASRPSMPVKVSQYSNLTVGNGGSGSQFSQPIVGHVAHRAQPLRYATHYSPVLSEPAYMQPSSPAVMVGRSPQLVYVQPVSHDLIHGTTAVPPVSARPLMNHVQFPKQQGGTIGPAMPVCVPPPVLTSGHQPFTLQSHIPLLQPGFPVSRPISVPGPNGFYGTKF* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0810 495 PANTHER ATAXIN 2-RELATED 1 492 IPR045117 GO:0003723
Gso18g0810 495 MobiDBLite consensus disorder prediction 7 22 - -
Gso18g0810 495 MobiDBLite consensus disorder prediction 142 279 - -
Gso18g0810 495 MobiDBLite consensus disorder prediction 173 190 - -
Gso18g0810 495 Pfam Ataxin 2 SM domain 26 104 IPR025852 -
Gso18g0810 495 PANTHER POLYADENYLATE-BINDING PROTEIN INTERACTING PROTEIN 1 492 - -
Gso18g0810 495 MobiDBLite consensus disorder prediction 1 22 - -
Gso18g0810 495 MobiDBLite consensus disorder prediction 191 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0810 Gso-Chr18 10223919 10238765 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0810 - - gmx:100809285 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0810 18 10223919 10238765 Gso8g2612 8 43771417 43779877 GST