Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2594 ATGGCTTCTATCCCATGCATCACCCACCACCATCACCCCATCACTTCCAACCCCAATAATAATAATGCCTTCCCTTCACCGCACGTCTCTGCCTCAAACTTGGCCTCACGGTTTCTGGGCACCCGAAGAAGAGTTGGGTCGCACAGCCTCACCTCTAGAATAATTGGACCCTCTAATGGCTCCAAATCCACGTGCTGGTTCAGGTTCGGCAAGAACGGCGTTGATGCCCAAGGTGCTGGCATCTATGGCAGCCAGGGCCGTGATGACTTCGATAGAGATGACGTGGAACAGTACTTCAACTATATGGGGATGCTTGCAGTAGAAGGTACATATGATAAAATGGAGGCTCTTCTAAGCCAAAACATCCACCCCGTGGACATCCTTCTGCTGTTAGCTGCCTCAGAAGGTGACAAGCCAAAAATTGAAGAACTCTTGAGAGCTGGAGCAAAATATGATGTAAAAGATGCAGACGGAAGGACGGCACTGGATAGGGCTGCCGACGAAATTAAAGATTTCATTCTTAATTTTTCAGTGCAGAGGGCATGA 546 0.489 MASIPCITHHHHPITSNPNNNNAFPSPHVSASNLASRFLGTRRRVGSHSLTSRIIGPSNGSKSTCWFRFGKNGVDAQGAGIYGSQGRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLLLAASEGDKPKIEELLRAGAKYDVKDADGRTALDRAADEIKDFILNFSVQRA* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2594 181 SUPERFAMILY Ankyrin repeat 104 166 IPR036770 -
Gso8g2594 181 PANTHER PROTEIN LHCP TRANSLOCATION DEFECT 1 181 IPR044242 GO:0006886|GO:0009570|GO:0090391
Gso8g2594 181 Gene3D - 87 178 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2594 Gso-Chr8 43557917 43561433 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2594 - - gmx:100500557 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2594 8 43557917 43561433 Gso8g2594 8 43557917 43561433 ECH
Gso18g0830 18 10707962 10711159 Gso8g2594 8 43557917 43561433 GST