Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0830 ATGGCTTCTATCTCATGCATCACCCACCACCCCATCACTTCCAAGCTCAATAATGCCTTCTCTTCACCCCACGTCTCTGCCTCAAACTTGGCCTCACGGTTTCTGGGCACCAGAAAAAGAGTTGGGTTGCATAGCCTCACCTCTAGAATAATTGGACCCTCTAATGGCTCCAAAGCCACATGCTGGTTCAGGTTCGGCAAGAACGGTGTTGATGCCAAAGGTGCTGGCATCTATGGCAGCCAGGGCCGTGATGACTTTGATAGAGATGACGTGGAACAGTACTTCAACTATATGGGGATGCTCGCTGTAGAAGGAACATATGATAAAATGGAAGCTCTTCTAAGCCAAAACATCCACCCCGTGGACATCCTTCTCCTGTTAGCTGCCTCAGAAAGTGACAAGCCAAAAATTGAAGAACTCTTGAGAGCTGGAGCAAAATACGATGTAAAAGATGCAGATGGACGGACGGCGTTGGATAGGGCTACCGACGAAATTAAAGATTTCATTCTTAATTTTTCCGTGCAGAGGGCATGA 534 0.4757 MASISCITHHPITSKLNNAFSSPHVSASNLASRFLGTRKRVGLHSLTSRIIGPSNGSKATCWFRFGKNGVDAKGAGIYGSQGRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVDILLLLAASESDKPKIEELLRAGAKYDVKDADGRTALDRATDEIKDFILNFSVQRA* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0830 177 PANTHER PROTEIN LHCP TRANSLOCATION DEFECT 1 177 IPR044242 GO:0006886|GO:0009570|GO:0090391
Gso18g0830 177 SUPERFAMILY Ankyrin repeat 100 162 IPR036770 -
Gso18g0830 177 Gene3D - 82 174 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0830 Gso-Chr18 10707962 10711159 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0830 - - gmx:100499940 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0830 18 10707962 10711159 Gso8g2594 8 43557917 43561433 GST