Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1775 ATGTCTGCTGCTGTGTGCGGAAGCAAGAGATCTTTCTTCGAAGAGCTTCCTCCTTCTCCGCCACTCTCCAAGAGGCTCCGTTGTTCCTCTTCGCCGATTCGATTCCCTCCTCCCTCTCCCGTCGACCAACTTCGCCCTCTCTTTCCCCACATGGACGACTTGGTTCTTGAGAGAGCTCTCCAAGAATGTGGCAATGATATAGATGCTGCCATCAAGAGGCTTAATGAGCTTTGCTTGGGAACTGCCGATAGAAATGGGATTGCTGAAGAATTGGAGGTTGTCATTAATCTGGATGCAGGTAATTTGGAAGGTGATGGAAATGCTTCTGTTTCTGAGGAGCAGCCTGCTTTGAACAACCACCTTCCGGCAGATGGAGCAGAATGGATTGATTTTTTTGTCAGGGAAATGATGGTTGCTACTAGTGTTGAAGATGCTAGAGCACGTGCTGCCAGAATGCTGGAGGTTCTAGAGAAATCAATCAGTGAAAGAGCAAAGGCTGAGGCAACTGATGTGCTTCAGAAGGAAAATTTGATGCTGAAAGAGCAAATTGAAGCGTTGATTAAGGAGAAAAATTCTTTCAAAAATGCTTTTAGAATCCAGCATGAACGATCTGCTGATTATGAGGTTAAGAACCAAGAGTTGCAGCATTTGAAGCAATTGGTGTCTCAATACCAGGAGCAGATTAAAACTCTTGAGGTGAATAACTATGCTTTGGCAATGCATTTGAAGCAGGCTCAACAGAGCAACCCTTTTCCTGGGCGCTTCCCACCTGATGTCTTCTAA 783 0.4559 MSAAVCGSKRSFFEELPPSPPLSKRLRCSSSPIRFPPPSPVDQLRPLFPHMDDLVLERALQECGNDIDAAIKRLNELCLGTADRNGIAEELEVVINLDAGNLEGDGNASVSEEQPALNNHLPADGAEWIDFFVREMMVATSVEDARARAARMLEVLEKSISERAKAEATDVLQKENLMLKEQIEALIKEKNSFKNAFRIQHERSADYEVKNQELQHLKQLVSQYQEQIKTLEVNNYALAMHLKQAQQSNPFPGRFPPDVF* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1775 260 Coils Coil 169 196 - -
Gso8g1775 260 Pfam CUE domain 41 76 IPR003892 GO:0043130
Gso8g1775 260 Gene3D - 38 79 - -
Gso8g1775 260 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 260 - -
Gso8g1775 260 Coils Coil 207 234 - -
Gso8g1775 260 ProSiteProfiles CUE domain profile. 36 81 IPR003892 GO:0043130
Gso8g1775 260 CDD CUE 39 74 - -
Gso8g1775 260 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 260 - -
Gso8g1775 260 SUPERFAMILY UBA-like 39 81 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1775 Gso-Chr8 17304111 17307402 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1775 - - gmx:100791728 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0067 15 570961 574234 Gso8g1775 8 17304111 17307402 PCT
Gso11g3730 11 52891573 52894757 Gso8g1775 8 17304111 17307402 PCT
Gso8g1775 8 17304111 17307402 Gso15g0067 15 570961 574234 PCT
Gso8g1775 8 17304111 17307402 Gso11g3730 11 52891573 52894757 PCT