Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3730 ATGTCTGCTGCGGTGTGCGGAAGCAAGAGATCTTTGTTCGAAGAGCTTCCCCCTTCCCCGCCAGTATCCAAGAGGCTCCGCTGTTCCTCCTCCCCTATTCGCCTCTCTCTCCCTTCTCTCATCGACCACCTTCGCCCTCTCTTCCCTCATATGGATGACCAGGTCCTCGAGAGAGCGCTCCAAGAATGTGGCAACGACCTAGATGCGGCCATCAAGAGCCTCCACGGCCTCTGTTTGGGATCTGCTGATGATAATTCTCAACCTGCTCCACAACCTGACCACCCTAACCTCGTCGTCGACACAGGTGCGTTGGAAGAGAATGGGGATGCTTCTGCTTCTGGGGATCAGCCCGCTGCTGCCAATTTTCCTGCCGGTGGAGCAGAATGGATTGACTTATTTGTTAGAGAGATGACGTGTGCTACTAGTGTTGATGATGCCAGGTCCCGTGCTGCTAGATTGCTGGAGGTTCTAGAGAAATCAATTACTGCACATGCGAGTTCTGGGGTGACAACGGCTCTTCAAAGGGAAAATTTGATGCTGAAGGAGCATATTGAAGCTTTGACTAAGGAGAAAAATTGTTTTAAAAGTGCTTTTAGAATCCAGCTTGAACGCCTTTCTGATTATGAGAATAGAAACCAAGAGTTGCAGCAATTGAAGCAGTTGGTATCTCAATATCAGGAGCAGATCAGAACTCTTGAGGTGAATAACTATGCTTTGCGAATGCATTTGAATCAGGCACAACAATACAGCCCCTTTCCTGGGTGTTTCCCTCCTGATGCCTTCTAG 786 0.4924 MSAAVCGSKRSLFEELPPSPPVSKRLRCSSSPIRLSLPSLIDHLRPLFPHMDDQVLERALQECGNDLDAAIKSLHGLCLGSADDNSQPAPQPDHPNLVVDTGALEENGDASASGDQPAAANFPAGGAEWIDLFVREMTCATSVDDARSRAARLLEVLEKSITAHASSGVTTALQRENLMLKEHIEALTKEKNCFKSAFRIQLERLSDYENRNQELQQLKQLVSQYQEQIRTLEVNNYALRMHLNQAQQYSPFPGCFPPDAF* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3730 261 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 261 - -
Gso11g3730 261 SUPERFAMILY UBA-like 37 81 IPR009060 GO:0005515
Gso11g3730 261 Pfam CUE domain 39 73 IPR003892 GO:0043130
Gso11g3730 261 ProSiteProfiles CUE domain profile. 36 82 IPR003892 GO:0043130
Gso11g3730 261 CDD CUE 39 74 - -
Gso11g3730 261 Gene3D - 38 82 - -
Gso11g3730 261 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 261 - -
Gso11g3730 261 Coils Coil 198 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3730 Gso-Chr11 52891573 52894757 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3730 - - gmx:100788683 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0067 15 570961 574234 Gso11g3730 11 52891573 52894757 GST
Gso11g3730 11 52891573 52894757 Gso8g1775 8 17304111 17307402 PCT
Gso8g1775 8 17304111 17307402 Gso11g3730 11 52891573 52894757 PCT