Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1766 ATGTTCTCTTCCTCAACTTCCTTCTTTCTTTGCCTTCTCCTCTTCTCTGTAACCTTTTGTCATGTTTTGGGGGATAAAGTATTTACAGGAACATATGGAGTAAACTACGGTAGGATAGCAGACAATCTACCTTCTCCTGAGAGTGTGGTTACTCTTCTGAAAGCTGCAAAGATTAGGAACATCAGAATATATGATGCTGATCGTCAAGTCCTGAATGCCTTCAAAGGGTCAGGGATTTCAATTAGTGTTTGTGTACCAAATGAGCTACTTAAAGAGATAAGTGTGGGAGAGGATCGTGCCATGAATTGGATCAAACAAAACGTTGAACCATATCTTCCAGGGACAAAAATCCGTGGCATTTCCATTGGGAATGAGATATTGGGAGGAGGAGATATGGAGCTTTGGGAAGCTTTGGTGCCTGCATCTAAAAATGTGTATTCTGCCCTTGCTAGGCTTAATTTGGCACATCAAATTCAGGTCTCAACTCCACATTCAGAGGCTGTGTTTGCAAATTCATACCCTCCATCTGCATGCACTTTTAGGGAGGATATTCTCCCTGTCATGAAGCCCCTCTTGCAATTCTTCTCACAAATTGGCACTCCTTTCTACATAAATGCATACCCTTTCTTGGCCTATAAGAATGATCCCCAACACATTGACATAAACTATGCTCTTTTCAAGAAAAACCCTGGGATTTATGATGCCAAGACAAAGCTACACTATGATAACATGTTTTTGGCCCAAGTTGATGCAGCATATGCTGCCTTGGACAAACTTGGGTTTGACAAGATGGAGGTCATTGTTTCCGAGACTGGTTGGGCCTCTAAAGGGGATGATAATGAAGCTGGGGCAACAGTGAAAAATGCAAGGACTTACAATAAAAATCTGCGTAAGTTACTGCTCAAGAAAAAGGGTACCCCTTATAGGCCCAAGATGGTAGTCAGGGCTTATATATTTGCTTTATTTAATGAGAATTTGAAGCCTGGCCCAACATCTGAGAGAAACTTTGGATTGTTCAAGCCAGATGGAAGCATTTCATATGATATAGGCTTTACTGGCCTTGTACCTTCCTCAGCAACCTCCCCTTTTCTTTCCTTCAAGGGTATTGGATCTTTATATGCAGTGGTTTCTACAAGTTGTGCGGCTTTTCTTATTCTTGTAGCATTATAA 1170 0.4137 MFSSSTSFFLCLLLFSVTFCHVLGDKVFTGTYGVNYGRIADNLPSPESVVTLLKAAKIRNIRIYDADRQVLNAFKGSGISISVCVPNELLKEISVGEDRAMNWIKQNVEPYLPGTKIRGISIGNEILGGGDMELWEALVPASKNVYSALARLNLAHQIQVSTPHSEAVFANSYPPSACTFREDILPVMKPLLQFFSQIGTPFYINAYPFLAYKNDPQHIDINYALFKKNPGIYDAKTKLHYDNMFLAQVDAAYAALDKLGFDKMEVIVSETGWASKGDDNEAGATVKNARTYNKNLRKLLLKKKGTPYRPKMVVRAYIFALFNENLKPGPTSERNFGLFKPDGSISYDIGFTGLVPSSATSPFLSFKGIGSLYAVVSTSCAAFLILVAL* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1766 389 SUPERFAMILY (Trans)glycosidases 32 350 IPR017853 -
Gso8g1766 389 PANTHER GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN 8 374 - -
Gso8g1766 389 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 374 IPR044965 GO:0004553|GO:0005975
Gso8g1766 389 Gene3D Glycosidases 31 354 - -
Gso8g1766 389 Pfam Glycosyl hydrolases family 17 33 351 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1766 Gso-Chr8 17217894 17220434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1766 28 360 Glycoside Hydrolase AT3G15800 75.749 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1766 - - gmx:113002394 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0073 15 623310 625364 Gso8g1766 8 17217894 17220434 PCT
Gso8g1766 8 17217894 17220434 Gso15g0073 15 623310 625364 PCT