Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0073 ATGATGTTATCTTCCTTTTTTCTTTGGCTTCTGCTATTCTCTTCATTATTTTCTCATGTTTTAGGGGATAAAGCATTTACAGGAACATATGGAGTAAACTATGGTAGGATAGCTGACAACTTACCTCCCCCAGAAAGCGTGGTTACCCTACTCAAAGCAGCAAAAATTAAGAACATTAGGATATATGATGCTGATCATCAAGTCCTCCGTGCCTTCAAAGGGTCTGGCATTGAAATTGTGGTTGGTCTTGGCAATGAATTTCTCAAGGACAAGAGTGTGGGGGAGGATAGAGCCATGAGTTGGGTCAAAGAAAACGTTCAGCAATTTCTTCCAGAGACCAAAATTTGCGGAATTGCGGTGGGAAATGAAATCTTGGGAGGCACGGATATGGAACTCTGGGAAGTTTTGCTCCCTGCAGCAAAAAATGTTTACAATGCCCTTAGTAAGCTTGGTCTAGCAAAAGATGTTCAGGTGTCAAGTCCACATTCTGAGGCTGTGTTTGCTAATTCCTTTCCTCCATCCTCATGCACTTTCAAGGAAGATGTCCTTCCTTATATGAAACCTCTCTTACAATTCTTCTCACAAATTGGCACTCCTTTCTTCATTAATGCATATCCCTTCCTTGCCTATAAGAATGATCCACAACATATTGATCTTAACTATGCCCTCTTCCTAAAAAATCCCGGGATTTATGATGCAAAGACTAAGCTGCATTATAGTAACATGTTTGAGGCTCAGGTTGATGCAGCTTATGCTGCCTTGGAGAAGGTTGGGTTTGACAAGATGGATGTTATTGTTTCTGAGACTGGTTGGGCTTCTCATGGGGATGATAATGAAGCTGGAGCAACAATAAAAAATGCAAGGACATATAATGGTAATTTGCGCAAGCGGTTGCTCAAGAAGAAAGGGACCCCTTATAGGCCAAAAAAAGTGGTGAAAGCTTATGTCTTTGCCTTGTTTAATGAGAATTTGAAGCCTGGCTCAACATCTGAGAGAAACTTTGGATTGTTTAAGGCTGATGGAAGCATTGCATATGATATTGGCTTCACTGGACTTGTACCTTCTTCAGCAACTTCATCTTTCCTTTCCTTCAAGGGTATTGGATCCTCCTTCATGATGGCTTTTACAAGCTTTGCTGCTTTTCTTTTTGTTGCATTGTAG 1161 0.4091 MMLSSFFLWLLLFSSLFSHVLGDKAFTGTYGVNYGRIADNLPPPESVVTLLKAAKIKNIRIYDADHQVLRAFKGSGIEIVVGLGNEFLKDKSVGEDRAMSWVKENVQQFLPETKICGIAVGNEILGGTDMELWEVLLPAAKNVYNALSKLGLAKDVQVSSPHSEAVFANSFPPSSCTFKEDVLPYMKPLLQFFSQIGTPFFINAYPFLAYKNDPQHIDLNYALFLKNPGIYDAKTKLHYSNMFEAQVDAAYAALEKVGFDKMDVIVSETGWASHGDDNEAGATIKNARTYNGNLRKRLLKKKGTPYRPKKVVKAYVFALFNENLKPGSTSERNFGLFKADGSIAYDIGFTGLVPSSATSSFLSFKGIGSSFMMAFTSFAAFLFVAL* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0073 386 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 7 381 IPR044965 GO:0004553|GO:0005975
Gso15g0073 386 Gene3D Glycosidases 29 352 - -
Gso15g0073 386 PANTHER GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN 7 381 - -
Gso15g0073 386 Pfam Glycosyl hydrolases family 17 31 349 IPR000490 GO:0004553|GO:0005975
Gso15g0073 386 SUPERFAMILY (Trans)glycosidases 30 348 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0073 Gso-Chr15 623310 625364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0073 25 358 Glycoside Hydrolase AT3G15800 76.119 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0073 - - gmx:100815468 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0073 15 623310 625364 Gso8g1766 8 17217894 17220434 PCT
Gso8g1766 8 17217894 17220434 Gso15g0073 15 623310 625364 PCT