Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1753 ATGGAGGCCCTGCACTTGCACCGCGTGCTTCTCATGCCTGTTTCCCAAAAAACCTCAATCTTTTTGCGCGCCAGTGGCACCCCATTATCCACACTTGCAAGGCCACCATTGCGTTGGAGCTCTCAAACTTGCAGTGCCAGAGCAGGGTGGTTTTTGGGTCTTGGAGCAGACAGCAAGAAGACCAATTTACCTGATACCGTCAAAGCCGGTGACCCCGTTCTGCACGAGCCAGCCCAGGATGTTGATCCTAACGAAATAAAGTCGGAGAGAGTGCAGAAGATCATTGATGACATGATCCAGGTCATGAGAAAGGCTCCTGGTGTTGGTCTTGCTGCTCCCCAGATTGGAATTCCTTTGAGGATAATTGTTTTGGAAGATACAAAAGAGTACATTAGTTATGTCTCAAAGGAAGAGGCTAAAACTCAAGATAGAAGACTTTTTGATCTTTTGGTGATCCTGAATCCCAAGCTAGAGAAGAAGGGCAAGAGGACTGCTCTGTTTTTTGAAGGGTGCTTGAGTGTTGACGGGTTCAGAGCAGTGGTGGAGCGACACCTTGACGTTGAAGTTACAGGTTTGGATCGTTATGGTGCACCAATCAAAATAATTGCTTCTGGCTGGCAGGCTCGGATTTTACAACACGAGTGTGATCACTTGGATGGAACTCTGTATGTTGATAAGATGCTACCTAGAACTTTCAGAACTGTGGACAACATGGACCTGCCTCTTGCCCAGGGGTGCCCCAAACTTGGTCCTCGCTAA 759 0.4796 MEALHLHRVLLMPVSQKTSIFLRASGTPLSTLARPPLRWSSQTCSARAGWFLGLGADSKKTNLPDTVKAGDPVLHEPAQDVDPNEIKSERVQKIIDDMIQVMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYVSKEEAKTQDRRLFDLLVILNPKLEKKGKRTALFFEGCLSVDGFRAVVERHLDVEVTGLDRYGAPIKIIASGWQARILQHECDHLDGTLYVDKMLPRTFRTVDNMDLPLAQGCPKLGPR* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1753 252 Hamap Peptide deformylase [def]. 62 238 IPR023635 GO:0042586
Gso8g1753 252 Pfam Polypeptide deformylase 67 229 IPR023635 GO:0042586
Gso8g1753 252 PANTHER PEPTIDE DEFORMYLASE 40 252 - -
Gso8g1753 252 TIGRFAM pept_deformyl: peptide deformylase 67 229 IPR023635 GO:0042586
Gso8g1753 252 PANTHER PEPTIDE DEFORMYLASE 40 252 IPR023635 GO:0042586
Gso8g1753 252 CDD Pep_deformylase 67 223 IPR023635 GO:0042586
Gso8g1753 252 PRINTS Peptide deformylase signature 96 125 IPR023635 GO:0042586
Gso8g1753 252 PRINTS Peptide deformylase signature 169 180 IPR023635 GO:0042586
Gso8g1753 252 PRINTS Peptide deformylase signature 181 199 IPR023635 GO:0042586
Gso8g1753 252 PRINTS Peptide deformylase signature 200 229 IPR023635 GO:0042586
Gso8g1753 252 Gene3D Peptide deformylase 62 251 IPR036821 -
Gso8g1753 252 SUPERFAMILY Peptide deformylase 65 234 IPR036821 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1753 Gso-Chr8 17103690 17106712 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1753 K01462 - gmx:100784292 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0092 15 744211 745709 Gso8g1753 8 17103690 17106712 PCT
Gso8g1753 8 17103690 17106712 Gso15g0092 15 744211 745709 PCT