Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0092 ATGGAAGTGGTGCGGCGGGTGGTTCCGAAGGTGTTGGAAAAGGGCGTCGTAATGAGTCGGAGGGAGATGAGCTCAGGTTCGGGTTGGTTGGCGGGAAAGTTGGCGAAAATAGTGAAAGCCGGAGAGGCTGTTCTGCACTCGCGAGCCGAAGAAGTTGAGGCCATTGAAATCAAGTCAGAGAGAGTGCAGAAGATCATCGACGACATGGTCCGCGTTATGAGAAAAGCACCTGGAGTTGGCCTCGCTGCCCCACAGATTGGAATCCCCTTAAGGATTATTGTTTTGGAAGACAAAATCCAATATATGGCTTATTTTTCAAACCAAGAGCTCAAGGCACAAGATAGAACACCTTTTGATCTTTTGGTCATCCTCAATCCCAAGCTAAAGAACACCACCACCAGGACTGCCCTATTCTTTGAAGGCTGCTTGAGTGTTCCTGGATATAGTGCTGTGGTAGAGCGGTACCTTGATGTTGAGGTTGCAGGTTTTGATCGTTACGATGGTACCTAG 510 0.4882 MEVVRRVVPKVLEKGVVMSRREMSSGSGWLAGKLAKIVKAGEAVLHSRAEEVEAIEIKSERVQKIIDDMVRVMRKAPGVGLAAPQIGIPLRIIVLEDKIQYMAYFSNQELKAQDRTPFDLLVILNPKLKNTTTRTALFFEGCLSVPGYSAVVERYLDVEVAGFDRYDGT* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0092 169 Pfam Polypeptide deformylase 35 165 IPR023635 GO:0042586
Gso15g0092 169 PIRSF Pep_def 16 169 IPR023635 GO:0042586
Gso15g0092 169 PANTHER PEPTIDE DEFORMYLASE 33 165 IPR023635 GO:0042586
Gso15g0092 169 CDD Pep_deformylase 37 166 IPR023635 GO:0042586
Gso15g0092 169 PANTHER PEPTIDE DEFORMYLASE 33 165 - -
Gso15g0092 169 SUPERFAMILY Peptide deformylase 35 166 IPR036821 -
Gso15g0092 169 PRINTS Peptide deformylase signature 67 96 IPR023635 GO:0042586
Gso15g0092 169 PRINTS Peptide deformylase signature 140 151 IPR023635 GO:0042586
Gso15g0092 169 PRINTS Peptide deformylase signature 152 169 IPR023635 GO:0042586
Gso15g0092 169 Gene3D Peptide deformylase 33 169 IPR036821 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0092 Gso-Chr15 744211 745709 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0092 K01462 - gmx:100306710 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0092 15 744211 745709 Gso8g1753 8 17103690 17106712 PCT
Gso8g1753 8 17103690 17106712 Gso15g0092 15 744211 745709 PCT