Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1737 ATGCACAACACAATGCCTAGTACTACACCAACTGGTTCCTCCTCTACTAGTCTGTTTGAGCTTCTCACCGAAATGAAGAAGCAATCCTATCCAGAATCACTCACCTTCCAAGCAAAATCTCCCTCCCAATTCTCCTCCGAATGCTGGTTCGACGATGCATGCATCCTGGACATGGATTACTTCGTCAAGACCCTTTCTGGCATCAAGGCCAAAGGTGTTCGTGCAGACCTTATCGGCTCCATCATCACACACTACGCCTCCAAATGGCTCCCTGACCTCTCGGCAGGTGACATGGCCGAAAGGGGTCTAACCCAATTCGAGGAATCGCCCGAAAGCGTGACAGCTTCATGGATGAAGAAGAGATTCTTCGTGGAAACCTTGGTGGGTGTTCTGCCTCCTGAGAAGGATGCAATTCCATGCAACTTTCTCCTTCGGCTTCTGAGAACAGCCAACATGGTTGGTGTTGAGGGTACCTACAGGCAAGAGCTTGAGAAGCGGATTTCGTGGCAGTTGGACCAGGCTTCCTTGAAGGAGTTGGTGATTCCCTCTTTCAGCCACACTTGCGGGACTCTATTGGATGTTGAGTTGGTCATTAGGCTGGTTAAGAGGTTTGTGAGTTTGGACAGTGAGGGAGCTAAGAGTGGTGCTTCTCTGGTTAAGGTGGCTAAGTTGGTTGATTCCTACCTCGCTGAGGCTGCTGTGGATGCCAATTTGAGCTTGAACGACTTCTTTACCCTTGCTGCAGCTCTTCCTAGCCATGCCAGAGCAACGGATGATGGCTTGTACAGAGCCATTGATACTTATCTAAAAGCACATTCAGGAGTGTCAAAGCAAGAAAGGAAGGGTCTGTGCAGGCTAATAGACAGCAGAAAACTAACACCAGAGGCATCACTTCACGCAGCACAAAACGAACGGTTCCCGGTGAGAGCAGTGATTCAGGTGCTACTCTCCGAGCAGAGCAAGCTGAACCGCCATGTGGATTGGAGCGGCTCGCTGGTGAGTGGAACAAGAAGCCCTGGAGGGTTGGACTTACCAACACGGTGTCTGTCGAAGCGCGAGGCGAATGCTCAACAACTCGAGATAAAGAGGCTGAAGGAAGACGTGTACAGGCTGCAAAGCCAGTGCAGTGCCATGCATGCACAGATGGAGAGAATGGTTGAGAAGAAGAAAGGCTTCTTCAAGTGGAAGAAGTTTGCATTTGGTAAAAGTGAGCATGACAAAATGGAACAAGAGCTTGAAGGAAATGGAATGTACACTCCTGCGGACCTGAAAACTAGATTGGTCAATGCCAAAGGTAGTAGTAAGAATACTCACAAGTGGAGGAAATCCATGTCATGA 1338 0.4933 MHNTMPSTTPTGSSSTSLFELLTEMKKQSYPESLTFQAKSPSQFSSECWFDDACILDMDYFVKTLSGIKAKGVRADLIGSIITHYASKWLPDLSAGDMAERGLTQFEESPESVTASWMKKRFFVETLVGVLPPEKDAIPCNFLLRLLRTANMVGVEGTYRQELEKRISWQLDQASLKELVIPSFSHTCGTLLDVELVIRLVKRFVSLDSEGAKSGASLVKVAKLVDSYLAEAAVDANLSLNDFFTLAAALPSHARATDDGLYRAIDTYLKAHSGVSKQERKGLCRLIDSRKLTPEASLHAAQNERFPVRAVIQVLLSEQSKLNRHVDWSGSLVSGTRSPGGLDLPTRCLSKREANAQQLEIKRLKEDVYRLQSQCSAMHAQMERMVEKKKGFFKWKKFAFGKSEHDKMEQELEGNGMYTPADLKTRLVNAKGSSKNTHKWRKSMS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1737 445 PANTHER OS12G0117600 PROTEIN 2 445 IPR043454 -
Gso8g1737 445 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 2 445 - -
Gso8g1737 445 ProSiteProfiles NPH3 domain profile. 47 321 IPR027356 -
Gso8g1737 445 Pfam NPH3 family 48 297 IPR027356 -
Gso8g1737 445 Coils Coil 354 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1737 Gso-Chr8 16992602 16995245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1737 46 345 EF-hand Containing Proteins AT3G44820 36.000 2.22e-53 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1737 - - gmx:100777676 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3693 11 52572004 52574730 Gso8g1737 8 16992602 16995245 PCT
Gso8g1737 8 16992602 16995245 Gso11g3693 11 52572004 52574730 PCT