Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3693 ATGGAAATGAAGAAGCCGTGTTGTGAAGAGTCAGAGACAATTGTTGGATCCTGGGAATGTTGGTTCGACGATGCATGCATCGTTGACATGGATTACTTTGTGAAGACCCTTTCAAGCATCAAACAGAAAGGTGTTCGTGCAGACTTGATTGGTTCCATCATCACTCATTATGCCTCCATATGGCTCCCTGACCTCTCTTCCTCTGCTGAAAATGGTGTCACCACTCACTTCCAATCCCCCGAAAGCGTCACAAATTCATGGATGAAGAAGAGGTTCTTTGTGGAAACCTTGGTGAGTGTTCTGCCTCCTGAGAAGGATTCTGTCCCATGCAACTTCCTCCTTCGCCTTCTCAGAACCGCCAACATGGTTCGTGTTGACGCCACTTATAGAGGTGAGCTTGAGAACCGGATTTCGTGGCAGCTAGACCAAGCTTCTCTCAAAGAGCTCATGATACCCTCCTTCAGCCACACGTGTGGGACACTCTTGGATGTTGAGCTAGTCCTCAGGTTGGTTAAGAGGTTTATGAGTTTGGACCGTGATGGTGCTGCTTTGGTTAAGGTGGCCAAGTTGGTTGATTGCTACCTCGCTGAGGCTGCTGTGGATGCCAATTTGACCTTGTCTGAGTTCATTGCACTTGCTGGAGCTCTTCCAAGTCATTCAAGAGCCACGGATGATGGCTTGTACCGAGCCATTGACACGTATCTAAAAGCACATCCAGATGTGTCAAAGCAAGAAAGGAAGGGCCTGTGTAGGCTGCTTGATAGCCGGAAACTCACAACGGAGGCCTCACTTCATGCAGCTCAGAATGAACGGTTGCCTGTGAGAGCTGTGATTCAGGTGCTCTTCTCCGAACAAACCAAACTCAACCGCCACATAGATTGGAGTGGCTCCTTCAGTAGCTTGAGGAGCCCCAATGGAGGCCTTGACCCACCAGGACGATGCCTTTCAAAGCGTGAAACAAATGCTCAGCAAATGGAGATAAGGAAGCTGAAGGAAGATGTTTACAGGCTGCAAAGCCAGTTCAATGCCATGCAAGGGCAGATGGAGAGAATGGCGGCGAAGAAGAAGGGCTTATTCAAATGGAGGAAGTTTGGAATGCCTACGTTTAGCAGAAATGTAGGAGAGGTGGAGAAAATTGAAGAAGAAGAGGAAGAGGAGGAGGCTGAAAGGGAAGTTGGATTTGGAAGACAAACACCTATGGACATGAAAACCAGTCTGGTCAAAAGGACTCCCCACAAGTGGAGGAAATCCATGTCCTGA 1260 0.4849 MEMKKPCCEESETIVGSWECWFDDACIVDMDYFVKTLSSIKQKGVRADLIGSIITHYASIWLPDLSSSAENGVTTHFQSPESVTNSWMKKRFFVETLVSVLPPEKDSVPCNFLLRLLRTANMVRVDATYRGELENRISWQLDQASLKELMIPSFSHTCGTLLDVELVLRLVKRFMSLDRDGAALVKVAKLVDCYLAEAAVDANLTLSEFIALAGALPSHSRATDDGLYRAIDTYLKAHPDVSKQERKGLCRLLDSRKLTTEASLHAAQNERLPVRAVIQVLFSEQTKLNRHIDWSGSFSSLRSPNGGLDPPGRCLSKRETNAQQMEIRKLKEDVYRLQSQFNAMQGQMERMAAKKKGLFKWRKFGMPTFSRNVGEVEKIEEEEEEEEAEREVGFGRQTPMDMKTSLVKRTPHKWRKSMS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3693 419 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 17 419 - -
Gso11g3693 419 MobiDBLite consensus disorder prediction 376 419 - -
Gso11g3693 419 PANTHER OS12G0117600 PROTEIN 17 419 IPR043454 -
Gso11g3693 419 Coils Coil 371 391 - -
Gso11g3693 419 Pfam NPH3 family 20 263 IPR027356 -
Gso11g3693 419 ProSiteProfiles NPH3 domain profile. 19 287 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3693 Gso-Chr11 52572004 52574730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3693 21 350 EF-hand Containing Proteins AT3G44820 31.452 1.54e-50 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3693 - - gmx:100777820 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3693 11 52572004 52574730 Gso8g1737 8 16992602 16995245 PCT
Gso8g1737 8 16992602 16995245 Gso11g3693 11 52572004 52574730 PCT