Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1692 ATGACTCTCCCTTCACACGATGCTTGGATTCACACTTCACACACACTCCTCCCCAGATGGAAATCTCTTTCCCTCCCTCATCAGCAGTCAACTCTTCCAATTTCTATATCAAGAGTTAACCAAGTTGATGCAGCGAGATTGGACGTTGAAATGTCAGCCATGTTGAAAGAACAGTTGGTTAAAGTGTTCTCATTAATGAAGCCAGGAATGTTATTTCAGTATGAAGCCGAGCTTGATGCTTTCCTTGAGTTTCTTATTTGGAGGTTCTCAATTTGGGTGGATAAGCCAACCCCAGGCATTGCTCTCATGAACCTGAGGTACAGAGACGAGCGTGCAGTAGAACCAAGAGATAAAGTCCGAACTGGTCTGGAGGGACCTGGACTCACTGTTGCTCAGAAGCTTTGGTATTGTATTGCCACTGTTGGTGGTCAGTATATATGGGCTCGCTTACAATCCTTCTCTGCTTTTCGTAGATGGGGTGATACTGAGCAGAGACCATTGGCTAGACGTTTATGGATCTTGATACAACGGATAGAAGGAATATATAGAGCTGCTTCATTTGGAAACCTGTTGATATTTCTTTGCACTGGAAGATATCGAAATCTTATTGAAAGAGCCTTACGAGCTAGGCTTGTATATGGAAGCCCGAATATGAATCGTGCTGTTAGCTTTGAATATATGAACCGGCAATTAGTTTGGAATGAATTTTCGGAAATGTTATTGTTGCTTCTCCCCCTTCTTAATTCATCATCCGTGAAAAATCTCCTTCGACCTTTTTCTAAAGATAAATCATTAAGTTCAGCTGAGGATGGCTCAGCATGTCCCATTTGTCAGGCTACTCCCACAATTCCTTATGTTGCTCTACCTTGCCAGCACAGATATTGTTACTACTGTCTTAGGACACGATGTGCTGCTGCTCCATCGTTTAGGTGTTCCAGGTGCAGTGAGCCCGTTGTTGCTATGCAACGACATGGTGGTGTCCCTTCAGAATGA 993 0.435 MTLPSHDAWIHTSHTLLPRWKSLSLPHQQSTLPISISRVNQVDAARLDVEMSAMLKEQLVKVFSLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAVEPRDKVRTGLEGPGLTVAQKLWYCIATVGGQYIWARLQSFSAFRRWGDTEQRPLARRLWILIQRIEGIYRAASFGNLLIFLCTGRYRNLIERALRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSVKNLLRPFSKDKSLSSAEDGSACPICQATPTIPYVALPCQHRYCYYCLRTRCAAAPSFRCSRCSEPVVAMQRHGGVPSE* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1692 330 Pfam Pex2 / Pex12 amino terminal region 48 252 IPR006845 -
Gso8g1692 330 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 248 325 IPR013083 -
Gso8g1692 330 SUPERFAMILY RING/U-box 269 320 - -
Gso8g1692 330 SMART ring_2 274 314 IPR001841 -
Gso8g1692 330 Pfam Zinc finger, C3HC4 type (RING finger) 274 314 IPR018957 GO:0046872
Gso8g1692 330 CDD RING-HC_PEX2 273 315 - -
Gso8g1692 330 ProSiteProfiles Zinc finger RING-type profile. 274 315 IPR001841 -
Gso8g1692 330 ProSitePatterns Zinc finger RING-type signature. 290 299 IPR017907 -
Gso8g1692 330 PANTHER - 3 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1692 Gso-Chr8 16563670 16568026 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1692 K06664 - gmx:100805856 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0155 7 1467540 1471868 Gso8g1692 8 16563670 16568026 GST