Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0155 ATGACTCTCCCTTCACACGATGCTTGGATTCACACTTCCCACACCCTCCTCCCCAGATGGAAATCTCTTTCCCTCCTCTCTCATCAGCAGTCAACTCTTCCAATTTCTATATCAAGAGTTAACCAAGTTGATGCAGCAAGATTGGACGTTGAAATGTCAGCCATGTTGAAAGAGCAGTTGGTTAAAGTGTTCTTATTAATGAAGCCAGGAATGTTATTTCAGTATGAAGCCGAGCTTGATGCTTTCCTTGAGTTTCTTATTTGGCGGTTCTCAATTTGGGTGGACAAGCCAACCCCAGGCATTGCTCTCATGAACCTGAGGTACAGAGATGAACGTGCAGTAGAACCAAGAGATAAAGGTATGAAGTCAGAACTGGTCTGGAGGGACCTGGACTCACTGTTGCTCAGAAGCTTTGGTATTGTGTTGCCACTGTTGGTGGCCAGTATATATGGGCTCGCTTACAATCCTTCTCTGCTTTTCGTAGATGGGGTGATACTGAGCAGACCGTTGGCTCGACGTTTATGGATCTTGATACAGCGGATAGAAGGAATATATAGAGCTGCTTCGTTTGGAAACCTGTTGATATTTCTTTGCACGGGAAGATATCGAAATCTTATTGAAAGAGCATTACGAGCTAGGCTTGTATATGGAAGCCCAAATATGAATCGTGCTGTTAGCTTTGAATATATGAACCGGCAATTAGTTTGGAATGAATTTTCGGAAATGTTATTGTTGCTTCTCCCCCTACTTAATTCATCATCTGTGAAAAATCTTCTTCGACCTTTCTCTAAAGATAAATCATCGGGTTCAGCCGAGGATGGCACAGCATGTCCCATTTGCCAGGCTACTCCAACAATTCCTTATGTTGCTCTACCTTGTCAGCACAGATATTGTTACTACTGTCTTAGGACACGATGTGCTGCTGCTCCATCATTTAGGTGTTCCAGGTGCAGTGAGCCTGTTGTTGCTATGCAACGGCTTGGTGGTGTCCCCACAGAATGA 1002 0.4411 MTLPSHDAWIHTSHTLLPRWKSLSLLSHQQSTLPISISRVNQVDAARLDVEMSAMLKEQLVKVFLLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAVEPRDKGMKSELVWRDLDSLLLRSFGIVLPLLVASIYGLAYNPSLLFVDGVILSRPLARRLWILIQRIEGIYRAASFGNLLIFLCTGRYRNLIERALRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSVKNLLRPFSKDKSSGSAEDGTACPICQATPTIPYVALPCQHRYCYYCLRTRCAAAPSFRCSRCSEPVVAMQRLGGVPTE* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0155 333 ProSitePatterns Zinc finger RING-type signature. 293 302 IPR017907 -
Gso7g0155 333 Pfam Pex2 / Pex12 amino terminal region 49 255 IPR006845 -
Gso7g0155 333 ProSiteProfiles Zinc finger RING-type profile. 277 318 IPR001841 -
Gso7g0155 333 CDD RING-HC_PEX2 276 318 - -
Gso7g0155 333 Pfam Zinc finger, C3HC4 type (RING finger) 277 317 IPR018957 GO:0046872
Gso7g0155 333 SMART ring_2 277 317 IPR001841 -
Gso7g0155 333 PANTHER - 3 330 - -
Gso7g0155 333 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 250 328 IPR013083 -
Gso7g0155 333 SUPERFAMILY RING/U-box 271 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0155 Gso-Chr7 1467540 1471868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0155 K06664 - gmx:100800681 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0155 7 1467540 1471868 Gso8g1692 8 16563670 16568026 GST