Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1664 ATGGGGGGCTCGGAAGGGGTGGGAGCATCGTCGAAGCAATTCGGTGTCACGAAGCCCATATCAATGGCTGGCCCAACGGTTACTGATTTGCAGAGGACTCGTGAGTTAGAGAAGTTTCTCGCTGTTTCGGGGCTTTACGAGAGCAAGGAGGAAGCTGCCAAAAGGGAAGAGGTTCTTCACCGACTTGGAGAGATAGTGAAAAATTGGGTGAAGCAACTTACCCGCCTTAGGGGATACACTGATCAAATGGTGGAAGATGCAAATGCTGTCATTTTGACTTTTGGTTCTTATCGGCTTGGTGTTCATGGTCCTGGGGCTGATTTAGACACTTTATGCATTGGGCCGTCCTATGTAAACCGGGAGGAGGATTTTTTCTACACATTGCATGATATCTTAGCTAACATCGAGGAAGTCACAGAACTGCAACCAATTCCGGATGCTCATGTCCCAGTTATGAAATTCAAGTTTGATGGAATATCAATTGATCTCCTCTATGCCAGTATTTCTCGATTGATTGTACCTGAAGACTTGGATATATCTGATGTCTCTGTTCTACACAATGTTGATGAGCCTACCGTGCGAAGTTTGAATGGCTGTAGGGTTGCAGATCAAATTCTAAAGCTTGTTCCTAATGTTGAGCACTTTCGCACAACACTTCGTTGCTTGAAATTTTGGGCCAAAAGGCGAGGCATTTATTCTAATGTGACAGGTTTTCTTGGTGGTGTTAACTTGGCACTTCTTGTAGCTCGAGTGTGCCAGTTTTATCCAAAAGCAGTTCCAAGTATGCTTGTTTCTAGATTCTTCAGGGTATATACACAGTGGCGGTGGCCAACTCCTGTCATGTTATGTCCAATAGAGGAGAATGATCTTGGGTTTCCTGTTTGGCATCCTGGTAAAAATCCTCGTGACAGATCCCATCATATGCCAATCATTACCCCTGCCTATCCCTGTATGAATTCTAGTTATAATGTTTCTATGAGCACACTTCGTGTGATGATGGAGCAGTTCCAATATGGCAATAAAATCTGTGGGGAAATAGAATTGAGTAAAGATTGTTGGAAGGCTCTGTTTGAAAAGTATAGTTTCTTTGAAAGCTATAAAAACTACTTGCAAGTTGATGTAGTTGCTGCTGATGCCGATGACTTGCGCAGCTGGAAAGGTTGGGTGGAATCACGCCTTCGCCAGCTGACTTTGATGATTGAACGTGATACTTTTGGGAAGTTGCAATGTCATCCCTATCATCATGAGTTTGTCGATACTTCAAGGCAGTGTGCCCATTGTGCTTTCTTTATGGGTTTGCATAGGAAAGAGGGAGAAGTTGTTCAAGAAGGCCAGCAATTTGATATACGAGGGACAGTTGAAGAATTTCGGCATTCTGTTAATATGTACATGTTCTGGAAACCAGGGATGGAGATTTATGTTTCTCATGTTCGTAGAAGGCAAATTCCATGCTATGTGTTTCCTGATGGTTATAAACGATCTCGGCCATCAAGGCCAACATCACAATTTGAGAATTGTAAATCATTTCATAATAATGAGGTTTCTGTGACTGAACATGTGGAGAGAATCCGTAAGAGGAAGAACAATGATGGTGTGGATGTGAGGGAGGATGCTATAGTTAAAAGGCAATATGCTTGTCCTCCTGGGGATAGATTGGCAAGACGCAACAGCCTTGGTACTGGTGGTTTGTCTGTTGAAGCTGTATCTGATAGTCAAGAGTTGAGAAGTGTGGAGTGCAATCATTTGTCAAACAGTGGGCAAGATGATTTGGATAGAACAGAGTCTCCTGAAGCTGCTTCAAATTCTAGTGTGATTACATCTGTTGGTTCTTCTGAAGATATTGTATCTGTGTCAGTGGCTGGTTGTGTTGAGAACTCCAGGGGTGTTGAAATGATGAACAATGGAAGGTTTGAGGATACTACTTATGGGAATGATTCTGTCACACTGGTGAAAAATATAGTGGCCAGTGGAAATGAAGTGTTTCAGCATGAGCTACAGCAGCAGTTGCAGCCGAATGCAATGCTAGGGATGGTTCTTGATTCTGCAGAAAAGGTTCTCTCAGAAGCTGTGCAAGAGCCGGTGATAAGGAGATTGAGTCTACCATCGACAGTTTAG 2115 0.4322 MGGSEGVGASSKQFGVTKPISMAGPTVTDLQRTRELEKFLAVSGLYESKEEAAKREEVLHRLGEIVKNWVKQLTRLRGYTDQMVEDANAVILTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTLHDILANIEEVTELQPIPDAHVPVMKFKFDGISIDLLYASISRLIVPEDLDISDVSVLHNVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVARVCQFYPKAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENDLGFPVWHPGKNPRDRSHHMPIITPAYPCMNSSYNVSMSTLRVMMEQFQYGNKICGEIELSKDCWKALFEKYSFFESYKNYLQVDVVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRQCAHCAFFMGLHRKEGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQIPCYVFPDGYKRSRPSRPTSQFENCKSFHNNEVSVTEHVERIRKRKNNDGVDVREDAIVKRQYACPPGDRLARRNSLGTGGLSVEAVSDSQELRSVECNHLSNSGQDDLDRTESPEAASNSSVITSVGSSEDIVSVSVAGCVENSRGVEMMNNGRFEDTTYGNDSVTLVKNIVASGNEVFQHELQQQLQPNAMLGMVLDSAEKVLSEAVQEPVIRRLSLPSTV* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1664 704 MobiDBLite consensus disorder prediction 582 605 - -
Gso8g1664 704 Gene3D Beta Polymerase, domain 2 47 203 IPR043519 -
Gso8g1664 704 CDD NT_PAP_TUTase 54 209 - -
Gso8g1664 704 Pfam Poly(A) polymerase predicted RNA binding domain 361 420 IPR007010 GO:0003723|GO:0043631
Gso8g1664 704 Pfam Poly(A) polymerase central domain 15 359 IPR007012 GO:0004652|GO:0043631
Gso8g1664 704 Pfam Nucleotidyltransferase domain 88 163 IPR002934 GO:0016779
Gso8g1664 704 Gene3D Poly(A) polymerase predicted RNA binding domain 361 477 - -
Gso8g1664 704 SUPERFAMILY PAP/OAS1 substrate-binding domain 210 358 - -
Gso8g1664 704 PANTHER NUCLEAR POLY(A) POLYMERASE 4 1 594 - -
Gso8g1664 704 SUPERFAMILY Nucleotidyltransferase 12 208 IPR043519 -
Gso8g1664 704 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 360 488 IPR011068 GO:0003723|GO:0016779|GO:0031123
Gso8g1664 704 PANTHER POLY A POLYMERASE 1 594 - -
Gso8g1664 704 Gene3D - 15 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1664 Gso-Chr8 16293300 16298545 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1664 K14376 - gmx:100783237 1414.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0128 7 1189991 1195174 Gso8g1664 8 16293300 16298545 GST