Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1615 ATGTCTGGAATTGTGGTTGTTTTCGACTTTGACAAGACCATCGTCGATGTCGACAGTGACAACTGGGTCGTCGATGATTTGGGTTTCACCGATTTGTTTAACCAGCTCCTTCCCACCATGCCTTGGAACTCTCTCATGGATAGGATGATGATGGAGCTTCATTCAAATGGTAAAACCATAGAGGACATTGAAGAGGTTTTGCATAGGATTCCCTTGCACCCCAGAGTTATACCTGCTATTCAAGCAGCTCATGCTTTAGGGTGTGATTTGAGGATTGTGAGTGATGCAAACGTGTTTTTTATTGAGACCATTCTGAAGCACTTGGGAATAAGGGAATACTTTTCGGAGATTAACACCAACCCGGGTTATGTTAATGAAGAAGGAAGGTTAAGGATTCAACCTTGCCATGACTTCAACAAAGCTTCTCATGGCTGCAGTTTATGCCCTCCAAACATGTGCAAGGGTTTGATCATAGATAGAATCCAAGATTCAATTTCACAAGAAAGTAACAGGAGAATGATCTATCTTGGTGATGGTAGTGGTGACTATTGCCCAAGCTTGAGGCTCAAAGAGAGAAACTTTATGATGCCAAGGAAGAACTTTCCAGTGTGGGACTTGATTTGCAAAGACCCTTTGCTTGTTAAGGCTGAAATCCATGGCTGGAGTGATGGAGAAGAGTTGGAGCAAGTTTTATTGCATTTAATCAACAAAATCTCAATGGAGGAAAATGTTCATGAGCAGTTAATTGCATCTGATTGCAAGTTACAGACTCTGTCTGTCTCTGCCTAA 789 0.4195 MSGIVVVFDFDKTIVDVDSDNWVVDDLGFTDLFNQLLPTMPWNSLMDRMMMELHSNGKTIEDIEEVLHRIPLHPRVIPAIQAAHALGCDLRIVSDANVFFIETILKHLGIREYFSEINTNPGYVNEEGRLRIQPCHDFNKASHGCSLCPPNMCKGLIIDRIQDSISQESNRRMIYLGDGSGDYCPSLRLKERNFMMPRKNFPVWDLICKDPLLVKAEIHGWSDGEELEQVLLHLINKISMEENVHEQLIASDCKLQTLSVSA* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1615 262 Gene3D - 2 188 IPR023214 -
Gso8g1615 262 PANTHER INORGANIC PYROPHOSPHATASE 1 261 - -
Gso8g1615 262 Pfam Putative Phosphatase 4 235 IPR016965 GO:0016791
Gso8g1615 262 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 261 IPR016965 GO:0016791
Gso8g1615 262 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
Gso8g1615 262 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 187 - -
Gso8g1615 262 SUPERFAMILY HAD-like 4 190 IPR036412 -
Gso8g1615 262 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 199 IPR006384 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1615 Gso-Chr8 15799012 15801055 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1615 K13248 - gmx:100785897 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0101 7 903944 906112 Gso8g1615 8 15799012 15801055 GST
Gso8g1615 8 15799012 15801055 Gso11g3607 11 51764521 51766915 PCT