Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso11g3607 | ATGGCTGGGATTGTGGTGATTTTTGACTTCGACTCGACAATCATCGAGTGTGATAGTGATAATTGGGTTCTTGACGAGTTTGGTTTAACTGAAAAGTTCTATCAGCTTCTTCCTAACATGCTTTGGAACCCTCTGATGGATAAGATGATGAATGAACTTCATTCACAAGGAAAAACCATTGAAGACATTGTACAAGTTCTGAACAGGACTCCAATGCATCCTCGCATTGTCCCAGCCATTAAGGCAGCATATTCCCTTGGGTGTGAGCTGAAGATTGTGAGCGACGCAAATATTTTCTTCATTGAAACAATTTTGAAGCATCATGGGGTGTGGAATTGTTTCTCGGAGGTCACTGCAAACCCCAGTTATGTTAACGAAGAAGGGAGGCTCAGAATTTCCCCCTACCATGATTATCTAAAATGTTCTCATGGATGCAATCTCTGTCCACCAAACATGTGCAAGGGAATGATCACAGAGAGAATCCAAAATTCGGTTGATGCTGCAGGAAAGAAGTTCATCTATCTTGGAGATGGAAGTGGAGACTTTTGCCCAAGTTTGAAGCTCAAAGATAGGGATTATTTGATGCCAAGAAAGAATTTCCCATTGTGTGATTTAGTATCTGAGAACTCTAAGCACATAAAGGCAGAGGTGCATGCTTGGAGGGATGGGGAAGAGCTTTATGATGTTCTGCTCCATTTTATCGACAAAGCTATTGGTGAAGGAAACAAGAATATCATTAGTTCTACTCCAATAGTATCAGTTGATTGCAAGTTGGGGTCAATTTCAATTGAGGCTCATAAACCTTTACCTAAAGCAATCCCAGTTCCTCAATAA | 834 | 0.4089 | MAGIVVIFDFDSTIIECDSDNWVLDEFGLTEKFYQLLPNMLWNPLMDKMMNELHSQGKTIEDIVQVLNRTPMHPRIVPAIKAAYSLGCELKIVSDANIFFIETILKHHGVWNCFSEVTANPSYVNEEGRLRISPYHDYLKCSHGCNLCPPNMCKGMITERIQNSVDAAGKKFIYLGDGSGDFCPSLKLKDRDYLMPRKNFPLCDLVSENSKHIKAEVHAWRDGEELYDVLLHFIDKAIGEGNKNIISSTPIVSVDCKLGSISIEAHKPLPKAIPVPQ* | 278 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso11g3607 | 277 | Pfam | Putative Phosphatase | 4 | 233 | IPR016965 | GO:0016791 | |
| Gso11g3607 | 277 | PANTHER | 2,3-DIKETO-5-METHYLTHIO-1-PHOSPHOPENTANE PHOSPHATASE | 1 | 277 | - | - | |
| Gso11g3607 | 277 | SUPERFAMILY | HAD-like | 5 | 185 | IPR036412 | - | |
| Gso11g3607 | 277 | PIRSF | PLP_phosphatas_PHOSPHO2 | 1 | 238 | IPR016965 | GO:0016791 | |
| Gso11g3607 | 277 | PANTHER | PHOSPHATASE, ORPHAN 1, 2 | 1 | 277 | IPR016965 | GO:0016791 | |
| Gso11g3607 | 277 | Gene3D | - | 2 | 188 | IPR023214 | - | |
| Gso11g3607 | 277 | TIGRFAM | HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB | 5 | 186 | - | - | |
| Gso11g3607 | 277 | TIGRFAM | DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | 4 | 198 | IPR006384 | GO:0016791 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso11g3607 | Gso-Chr11 | 51764521 | 51766915 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso11g3607 | K13248 | - | gmx:100789743 | 579.326 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso7g0101 | 7 | 903944 | 906112 | Gso11g3607 | 11 | 51764521 | 51766915 | PCT | |
| Gso8g1615 | 8 | 15799012 | 15801055 | Gso11g3607 | 11 | 51764521 | 51766915 | PCT |