Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1589 ATGGGAAACATGAGTTGCAGCTTCAACCAGACTGATTCAGTTGAGTGCTGTGAAGCTGAAATTCAGAAGGCTGATTCTCAGGAATCTGGTCCTCCCTTGAAGAAGTCAAAAACTGAAATTTTGGCCTCTCAAAATGTAGATAACTGTGAAATGGAGGAAAGTGAGGATAGACTTAGTGACATGCCGGATTGTATTATCCATCATATCTTGTCATTTATGGAAACAAAGGATGCAATTCAAACTTGTGTTTTATCGAAGCGGTGGAGGTACCTTTGGGCTTCAGTTCCCTGCCTGAATTTCAGCAGCAAATCATTCATGCGATTGGTTGACTTTAAGAAGTTTGTGCTGTGGGTCCTAAACCATCGCGATTCTTCTCATGTCAAACTTCTTGTTTACTACCGTTTTGGGGTAGATTATGCGACAGATCAAGGTCTATTGAATAAGGTTATTGAATATGCAGCATCACATGGGGTGGAAGAAATCAAAATCAATCTCCGGGCAAAAACTGCTGGCAGAACCTCTGGCAGTCCACCAGTTGAAATTCCTTTTTCTTTATTTACTTGCCAATCTTTGAAAAAGCTCGAGTTAAAAGATTGCCATCCTACGAATGGGTCATCATCCCTTTTAGGTTGCAAATCATTGGACATTTTGCATCTGGAACAGTTTTCAATGCATCCTGTTGCAGCTGACTTTTCAAATCCATTTGCAAGTTTGGCAGAACTATTTGGTTTTACAACTTTGACAACTCTGCATCTAAATAACTTCATTCTGTGTTATACAGGAACTGACTGTCTGGATCCATTTGCTAATTGTGTCCATTTGAAGAATTTGCACCTAAGTGAAATGTCCTTTAAGTCAGATTTGAACCCTAAGGATTTTGTGATATCTGCTCCTAAACTTAGTAACTTGAATCTGATGTGCAACCGCTTTAAATGCAAGATTGTAGTTGCTGCACCACAGCTTTCCAATTTCATTTACTTGTATTCTACACCTTGTGCCTTTTTTGAGTTTCGGCTTCCTTCTATGGATGGCTTGGTCATTGATATACATGAACCACATGATCGATTGGAAAAATGTCGTCGAAGGAAAAAAGAGGAGACTTTACATGGTTTGATCAATATGTTACAGGGACATCATAATGCAGAAGCTGTTAAACTATCCTTCTGTACAGTTAAGGTTACTTGTGGAGCGTCAGCCCTTGTGAAGCCAGCATGTTTGCCTTCTACTAAATTGAAGTCATTGAACTTTGGAGTTGGATCAACATATAAAATCTTCATCAACAACCTTGACCATATAACAGCCTACTTCCGCAATTGTTCTCAGCATGCAGACTTTGAGATTGTGACTGTTTAG 1353 0.3939 MGNMSCSFNQTDSVECCEAEIQKADSQESGPPLKKSKTEILASQNVDNCEMEESEDRLSDMPDCIIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLNFSSKSFMRLVDFKKFVLWVLNHRDSSHVKLLVYYRFGVDYATDQGLLNKVIEYAASHGVEEIKINLRAKTAGRTSGSPPVEIPFSLFTCQSLKKLELKDCHPTNGSSSLLGCKSLDILHLEQFSMHPVAADFSNPFASLAELFGFTTLTTLHLNNFILCYTGTDCLDPFANCVHLKNLHLSEMSFKSDLNPKDFVISAPKLSNLNLMCNRFKCKIVVAAPQLSNFIYLYSTPCAFFEFRLPSMDGLVIDIHEPHDRLEKCRRRKKEETLHGLINMLQGHHNAEAVKLSFCTVKVTCGASALVKPACLPSTKLKSLNFGVGSTYKIFINNLDHITAYFRNCSQHADFEIVTV* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1589 450 PANTHER CYCLIN-LIKE F-BOX 42 450 - -
Gso8g1589 450 SUPERFAMILY F-box domain 54 110 IPR036047 GO:0005515
Gso8g1589 450 Gene3D Ribonuclease Inhibitor 156 329 IPR032675 -
Gso8g1589 450 PANTHER F-BOX PROTEIN-LIKE 42 450 - -
Gso8g1589 450 Pfam F-box domain 58 95 IPR001810 GO:0005515
Gso8g1589 450 SMART fbox_2 61 101 IPR001810 GO:0005515
Gso8g1589 450 ProSiteProfiles F-box domain profile. 55 108 IPR001810 GO:0005515
Gso8g1589 450 Gene3D - 42 98 - -
Gso8g1589 450 SUPERFAMILY L domain-like 180 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1589 Gso-Chr8 15542269 15547450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1589 54 225 EF-hand Containing Proteins AT5G41840 31.443 7.24e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1589 - - gmx:100777866 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0076 7 659939 664826 Gso8g1589 8 15542269 15547450 GST