Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0076 ATGGGGAATATGACTTGCAGCTTCAACAAGACTGATTCAATTGAGTGCTGTGAAGCTGAAATGCAGAAGGCTGATTCTCAGGAATCTGGTCCTGCGTTGAAGAAGTCAAAAACCAAAATTTTGGCCTCTCAAAATGTAGATAATTGTGAAATGGAAGAAAGTCAGGATAGACTTAGTGACATGCCGGATTGTCTTATCCATCATATTTTGTCATTTATGGAAACAAAGGATGCAATTCAAACTTGTGTTTTGTCGAAGCGGTGGAGGTATCTTTGGGCTTCAGTTCCCTGCCTGAGTTTCAGCAGCAAATCATTCATGCGTTTGGTTAACTTTAAGAAGTTTGTGCTGTGGGTCCTAAACCATCGCGATTCTTCTCATGTCAAACTTCTTGTTTACTACCGTTTTGGGGTAGATTATACGACAGATCAAGGTCTATTGAATAAGGTTATTGAGTATGCAGCATCACATGGGGTTGAAGAAATCAAAATCAATCTCCGGGCAAAAACCGCTGGCAGAACCTCTGGCAGTCCGCCAGTTGAAATTCCTTTGTCTCTATTTACTTGCCAATCTTTGAAAAAGCTCGAGTTAACAGATTGCCATCCTACGAATGGGTCATCCCCGTTAGGTTGCACATCATTGGACATGTTGCATCTGGAACAGTTTTCAATGCATCCTGCTGCAGCTGACTTTTCGAATCCATTTGCAAGTTTGGCAGAACTATTTGGTTTTACAACATTGACAACTCTGCATCTAAATAACTTCATTCTGTGTTATACAGGAACTGACTGTTTGGATCCATTTGCTAATTGTGTCCATTTGAAGAATTTGCACTTAAGTGAAATGTCCTTTAATTCAGATTTGAACTCTAAGGATTTTGTGATATCTGCTCCTAAGCTGAGTAACTTGAATCTGATGTGCAACCGCTTTAAATGCAAGATTGTAGTTGCTGCACCACAGCTTTCCAATTTCATTTACTTGTATTCTACACCTTGTGCCTTTTTTGAGTTTCGTCTTCCTTCTATGGATGGCTTGATCATTGATATACATGAACCACATTATCGATTTGAAAAATGTCGTCGAAGGAAAAGAAAGGAGACTTTACATGGTTTGATCAATATGTTACGGGGACATCATAGTGCAGAAGCTGTTAAACTATCATTCTCTACAGTTAAGGTTATTTGTGGAGCTTCAGCCCTTGTGAAGCCAGAATGTTTGCCTTCTAGTAAATTGAAGTCATTGAACTTTGGAGTTGGATCAACATATAAAATCTTCATCAACAACCTTGACCATATAACAGCCTACTTCCGCAATTGTTCTCAGCATGCAGACTTCGAGATTGTGACTGTTTAG 1350 0.3941 MGNMTCSFNKTDSIECCEAEMQKADSQESGPALKKSKTKILASQNVDNCEMEESQDRLSDMPDCLIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLSFSSKSFMRLVNFKKFVLWVLNHRDSSHVKLLVYYRFGVDYTTDQGLLNKVIEYAASHGVEEIKINLRAKTAGRTSGSPPVEIPLSLFTCQSLKKLELTDCHPTNGSSPLGCTSLDMLHLEQFSMHPAAADFSNPFASLAELFGFTTLTTLHLNNFILCYTGTDCLDPFANCVHLKNLHLSEMSFNSDLNSKDFVISAPKLSNLNLMCNRFKCKIVVAAPQLSNFIYLYSTPCAFFEFRLPSMDGLIIDIHEPHYRFEKCRRRKRKETLHGLINMLRGHHSAEAVKLSFSTVKVICGASALVKPECLPSSKLKSLNFGVGSTYKIFINNLDHITAYFRNCSQHADFEIVTV* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0076 449 SUPERFAMILY L domain-like 179 334 - -
Gso7g0076 449 Gene3D Ribonuclease Inhibitor 156 330 IPR032675 -
Gso7g0076 449 SUPERFAMILY F-box domain 54 107 IPR036047 GO:0005515
Gso7g0076 449 Pfam F-box domain 58 95 IPR001810 GO:0005515
Gso7g0076 449 PANTHER CYCLIN-LIKE F-BOX 42 449 - -
Gso7g0076 449 ProSiteProfiles F-box domain profile. 55 108 IPR001810 GO:0005515
Gso7g0076 449 PANTHER F-BOX PROTEIN-LIKE 42 449 - -
Gso7g0076 449 SMART fbox_2 61 101 IPR001810 GO:0005515
Gso7g0076 449 Gene3D - 42 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0076 Gso-Chr7 659939 664826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0076 54 226 EF-hand Containing Proteins AT5G41840 30.052 5.79e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0076 - - gmx:100781595 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0076 7 659939 664826 Gso8g1589 8 15542269 15547450 GST