Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g1570 ATGTTTCCAGAGTGCTTGAAAAGGTTGTTCAGCAGAAGCCAGAAGGTGAAGGGGAGGGTGGTGTTGATGCGTAAGAATGTGCTTGACTTCAACAACTTAACGAGTGTGGTAGGGATTGTTGGCACTAGCAAAAGCCTAATTGGCTCAGCAGTTGATGGTGTTACTTCCTTAATGGGCAAATCTGTGTGTATCCAGTTGATTAGTGCTACCAAGGCTGATGCAAATGGAAATGGGATAGTCGGAAAGAAGGCCTATTTGGAAGGTATTATTGCCTCGATACCAACTTTGGGAGCTGGCCAATCTGCATTTAATATTAATTTTAAATGGGACAGTGACATGGGAATTCCTGGAGCATTTATAATAACAAATCATATGAATGTTGAGTTCTTCCTAGTGAGTTTGACTCTTGAAGACATTCCTAATCAAGGAACCATGCACTTTGTTTGCAACTCATGGGTTTACAACTATGAAGATTACAAACAGAATCGAATTTTCTTTGTCAACGAGACATATGTTCCAAGTGAAACACCTGGTCCATTAGTGACATATAGAGAAGCAGAATTGCAGGCTCTAAGAGGAAATGGAACAGGGAAGCGCAAGGAATGGGACAGAGTTTATGATTATGATGTTTACAATGATTTGGGCAATCCTGACAGTGGTGAAAACTTTGCTCGTCCAGTTCTTGGAGGATCTCTCACTCATCCCTACCCTCGTAGGGGAAGAACCGGTAGAAAACCAACAAAGAAAGATTCCAAAAGCGAGAAACCGGGACATGTTTATGTTCCAAGAGATGAAATTTTTGGTCACTTGAAGTCATCTGACTTCCTTAGTTATGGGATAAAATCTTTATCTCGAAGTTTCTTACCTGCAATCAAATCAATATTTGATTTAAAATTCACACCGAATGAGTTTGGTAGCTTTGAAGAAGTACGTGAACTCTGTGAAGGTGGAATTAAGCTGCCTACAGATATACTTAGCAAAATTAGCCCCTTACCAGTGCTCAAGGAAATCTTCCGCACTGATGGTGAAGATAATCTCCTCAAGTTTTCAATACCTCATTTAATTCAAGTTAATAAATCTGCATGGATGACTGACGATGAATTTGCAAGAGAGATGATTGCTGGTGTAAACCCTTGCGTGATTCGCCTTCTACAAGAGTTTCCACCACAGAGCAAGCTAGATCCGTCAGTCTACGGTGATCAAACGAGTAAACTGACTGAAGAACACTTGAAGATTAACCTTGAAGGACTAACAGTAGATAAGGCAATTGAAGGTCAGAGACTATTCATATTAGATCACCATGACGTATTTATGCCATTTTTGACGAGGCTAAACGAATCAAAATCAACAAAGGCTTATGCTACCAGGACAATCCTTTTCTTGAAAGATGATGGAACCTTAAAGCCATTGGCCATTGAATTAAGTTTGCCACATTCAGGTGGACAACACCTTGGTGCCGATAGTAAAGTCATCTTGCCTGCAAACCAAGGCGTTGAAAGTACAATTTGGCTATTGGCTAAGGCTTATGTTGTTGTTAATGATTCCTGCTATCATCAGCTCATAAGCCATTGGCTGAATACTCATGCTGTGATTGAGCCATTTGTCATAGCAACAAACAGGAATCTCAGTGTTCTTCACCCTGTTTATAAGCTTCTATTTCCTCACTATCGTGACACAATGAATATCAATGCACTTGCTCGACAATCACTAATTAATGCTGATGGCATTATAGAGCAATCCTTTTTGGGTGGCAAGTATTCTATGGAGATTTCTTCAGAAGCTTACAAAGCTTGGGTGTTCCCTGACCAAGCATTACCAGCTGATCTTATCAAGAGGGGAATGGCTACTGAGGATTCATCTTGTCCCAACGGCCTTCGTCTTGTGATAGAAGACTACCCTTATGCTGTTGATGGACTGGAAATATGGGATGCTATTAAGACATGGGTACAAGAGTATGTTTCCTTGTACTATGCCACAGATGATGCAGTTAAGAAAGACTCTGAACTCCAAGCTTGGTGGAAGGAAGTTGTTGAGAAGGGTCATGGTGACCTGAAAGACAAGCCTTGGTGGCCTAAAATGCAGACTCTTCAAGAGCTTATTCAATCATGTTCTACTATCATATGGATTGCTTCAGCTCTCCATGCAGCTGTTAATTTTGGGCAATACCCTTATGGTGGTTTTATCCTAAACCGTCCAACTCTTAGCAGAAGATTGATCCCGGAAAAAGGAACTCCAGAATATGATGAGATGGTGAAAAGTCATCAAAAGGCTTATTTGAAAACAATTACGCCAAAGTTTCAGACTCTTGTTAACCTTTCAGTGATAGAGATATTGTCAAGGCATGCTTCTGATGAGATCTACCTTGGACAGAGGGACAACAGTCCTAATTGGACCTCTAATTCAAGGGCAATAGAAGCCTTTAAAAAGTTTGGAAAAAAGCTAGCAGAGATTGAGACAAAAATCTCAGAAAGGAACAATGATCCAAATCTTAGAAATCGAACTGGACCAGCCAAATTGCCCTACACTGTGCTTCTTCCTACCAGTAAACCGGGGTTGACTTTTAGAGGAATTCCTAACAGTATCTCTATCCATCATCAAGAAGAAGTTGTAAAGATGTTAGGGCTATTTGACAAGAGCCACAAGATCAAGGGCACTGTGGTGTTGATGCCCAAAAGTGTCTTGGACATTAACGACTTGAATTCAGTCAAAAATGGCGGAGTTGGTGGCGTTGTCTCTGGTATCTTTGGCGCCGTCGCCGACGTAACCGGCCAAATAGTTGATACTGCAACTGCCATCTTTTCCCGGAACGTCTCCTTCAAGTTGATCAGTGCTACCTCCACTGATGCAAAGGGAAATGGGAAAGTTGGAAACGAAACCTTTTTGGAGAAGCATCTTCCGACGCTACCAACCTTGGGAGATAGAAGGGATGCATACGATATTCATTTCGAATGGGATGCTAACTTTGGAATTCCAGGAGCATTTTACATCAGAAACTACACCTATGATGAGTTCTTCCTTGTCAGTGTCACTCTTGAGGACATTCCAAATCATGGAACCATTCACTTCGTCTGTAACTCATGGGTTTACAACTTTAAAGACTACGACAAAAAGGATCGTATTTTCTTTGCCAATAAGACATATCTTCCAAGTGCAACACCGGGTCCATTAGTTAAGTATAGAGAAGAAGAGTTGAAGATTTTAAGAGGAGATGGAACGGGAGAGCGCAAGGAACATGAAAGGATCTATGATTATGATGTCTACAATGATTTGGGTAATCCAGATGAAGATGTAAAGCTTGCTCGTCCAGTTCTTGGAGGCTCCAGCACCTATCCTTATCCTCGTAGGGTTAGAACTGGTAGAAAAGCCACCAAGAAAGATCCTAAAAGCGAGAGACCAGCAAGCGAGCTTTACATGCCAAGAGATGAAAAATTCGGTCACTTGAAGTCATCAGATTTCCTCACATATGGAATAAAATCATTATCTCAAAAGCTCTTACCTTCGCTCGAAAACGTTTTTGATTCAGACCTCACATGGAATGAGTTTGATAGCTTTGAAGAAGTAAGAGACCTGTATGAAGGTGGAATTAAGGTTCCAACAGTTGTTCTTAGCGACATTAGCCCCATACCAATCTTCAAGGAAATCTTTCGCACTGATGGTGAAAGTGTCCTTCAATTTCCACCACCTCATGTAGTCCAAGTTACTAAATCTGCATGGATGACCGATGACGAATTTGCAAGAGAGATGATTGCAGGTGTAAACCCAAATGTAATTCGTCTTCTTAAAGAGTTCCCCCCACAAAGCAAGCTGGATCCCTCTCTCTATGGTGATCAATCTAGTACAATAACAAAAGAACATTTGGAGATTAACATGGATGGGGTAACAGTAGAAGAGGCACTTAATGGTCAGAGATTATTCATATTAGATTATCAAGACGCATTCATGCCATATTTGACAAGGATAAACGCACTACCTTCTGCAAAGGCTTATGCCACAAGGACAATCCTGCTCTTGAAAGATGATGGGACTTTGAAGCCACTTGCTATCGAATTGAGCAAGCCACATCCAAGTGGAGATAATTTGGGTGCCGAGAGCAAAGTGGTCTTGCCTGCAGACCAAGGTGTTGAAAGCACAATTTGGCTATTGGCCAAGGCTCATGTTATTGTAAATGACTCGGGCTATCATCAACTCATGAGCCACTGGTTAAATACTCATGCAGTGACAGAGCCCTTCATCATAGCAACAAACAGGCGTCTCAGTGTGCTTCACCCCATTTATAAACTTCTTTATCCTCACTATCGTGACACCATAAATATCAATGGACTTGCTAGGAATGCCCTAATTAATGCTGGTGGCGTTATAGAGGAATCATTTTTGCCTGGACGGTATTCTATCGAGATGTCTTCAGCTGTTTACAAGAATTGGGTTTTCACTGACCAAGCATTACCGGTCGATCTCATCAAGAGAGGAATGGCAGTTGAGGATCCATCCTCTCCCCATGGCCTTCGTCTTGCGGTAGAGGACTACCCATATGCTGTTGATGGACTAGAAATATGGGATGCTATTAAGTCATGGGTCCAAGAGTATGTTTCCTTGTATTACCCAACAGATTTGGCAATTCAACAAGATACTGAACTCCAAGCATGGTGGAAGGAAGTTGTTGAGAAGGGTCATGGTGACTTAAAAGACAAGCCTTGGTGGCCTAAAATGCAGACTCGTCAAGAGCTTATTCAATCATGTTCTACTATCATATGGATTGCTTCAGCTCTCCATGCAGCTGTTAATTTTGGACAATACCCTTATGGTGGTTTTATCCTAAACCGTCCAACTCTTAGCAGAAGATGGATTCCAGAACCAGGAACCAAAGAATATGATGAGATGGTGGAGAGTCCCCAAACGGCTTATTTGAGAACCATTACACCGAAGCGCCAAACCATTATTGATCTTACGGTGATAGAGATATTGTCAAGGCATGCTTCTGATGAGATCTACCTTGGGGAGAGAGACAATCCTAATTGGACATCTGATTCAAAGGCATTAGAAGCATTCAAAAAGTTTGGAAGCAAGCTGGCAGAAATTGAGGGAAAAATCACAGCGAGAAACAAGGATTCAAATAAGAAAAATCGCTATGGACCAGTTCAGCTGCCATACACATTGCTCCTTCCTACAAGTGAGGAAGGGTTGACTTTCAGAGGAATTCCCAACAGTATCTCTATCTAA 5217 0.4158 MFPECLKRLFSRSQKVKGRVVLMRKNVLDFNNLTSVVGIVGTSKSLIGSAVDGVTSLMGKSVCIQLISATKADANGNGIVGKKAYLEGIIASIPTLGAGQSAFNINFKWDSDMGIPGAFIITNHMNVEFFLVSLTLEDIPNQGTMHFVCNSWVYNYEDYKQNRIFFVNETYVPSETPGPLVTYREAELQALRGNGTGKRKEWDRVYDYDVYNDLGNPDSGENFARPVLGGSLTHPYPRRGRTGRKPTKKDSKSEKPGHVYVPRDEIFGHLKSSDFLSYGIKSLSRSFLPAIKSIFDLKFTPNEFGSFEEVRELCEGGIKLPTDILSKISPLPVLKEIFRTDGEDNLLKFSIPHLIQVNKSAWMTDDEFAREMIAGVNPCVIRLLQEFPPQSKLDPSVYGDQTSKLTEEHLKINLEGLTVDKAIEGQRLFILDHHDVFMPFLTRLNESKSTKAYATRTILFLKDDGTLKPLAIELSLPHSGGQHLGADSKVILPANQGVESTIWLLAKAYVVVNDSCYHQLISHWLNTHAVIEPFVIATNRNLSVLHPVYKLLFPHYRDTMNINALARQSLINADGIIEQSFLGGKYSMEISSEAYKAWVFPDQALPADLIKRGMATEDSSCPNGLRLVIEDYPYAVDGLEIWDAIKTWVQEYVSLYYATDDAVKKDSELQAWWKEVVEKGHGDLKDKPWWPKMQTLQELIQSCSTIIWIASALHAAVNFGQYPYGGFILNRPTLSRRLIPEKGTPEYDEMVKSHQKAYLKTITPKFQTLVNLSVIEILSRHASDEIYLGQRDNSPNWTSNSRAIEAFKKFGKKLAEIETKISERNNDPNLRNRTGPAKLPYTVLLPTSKPGLTFRGIPNSISIHHQEEVVKMLGLFDKSHKIKGTVVLMPKSVLDINDLNSVKNGGVGGVVSGIFGAVADVTGQIVDTATAIFSRNVSFKLISATSTDAKGNGKVGNETFLEKHLPTLPTLGDRRDAYDIHFEWDANFGIPGAFYIRNYTYDEFFLVSVTLEDIPNHGTIHFVCNSWVYNFKDYDKKDRIFFANKTYLPSATPGPLVKYREEELKILRGDGTGERKEHERIYDYDVYNDLGNPDEDVKLARPVLGGSSTYPYPRRVRTGRKATKKDPKSERPASELYMPRDEKFGHLKSSDFLTYGIKSLSQKLLPSLENVFDSDLTWNEFDSFEEVRDLYEGGIKVPTVVLSDISPIPIFKEIFRTDGESVLQFPPPHVVQVTKSAWMTDDEFAREMIAGVNPNVIRLLKEFPPQSKLDPSLYGDQSSTITKEHLEINMDGVTVEEALNGQRLFILDYQDAFMPYLTRINALPSAKAYATRTILLLKDDGTLKPLAIELSKPHPSGDNLGAESKVVLPADQGVESTIWLLAKAHVIVNDSGYHQLMSHWLNTHAVTEPFIIATNRRLSVLHPIYKLLYPHYRDTININGLARNALINAGGVIEESFLPGRYSIEMSSAVYKNWVFTDQALPVDLIKRGMAVEDPSSPHGLRLAVEDYPYAVDGLEIWDAIKSWVQEYVSLYYPTDLAIQQDTELQAWWKEVVEKGHGDLKDKPWWPKMQTRQELIQSCSTIIWIASALHAAVNFGQYPYGGFILNRPTLSRRWIPEPGTKEYDEMVESPQTAYLRTITPKRQTIIDLTVIEILSRHASDEIYLGERDNPNWTSDSKALEAFKKFGSKLAEIEGKITARNKDSNKKNRYGPVQLPYTLLLPTSEEGLTFRGIPNSISI* 1739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g1570 1738 Pfam Lipoxygenase 180 846 IPR013819 GO:0016702|GO:0046872
Gso8g1570 1738 Pfam Lipoxygenase 1056 1721 IPR013819 GO:0016702|GO:0046872
Gso8g1570 1738 MobiDBLite consensus disorder prediction 1114 1135 - -
Gso8g1570 1738 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 1046 1738 IPR013819 GO:0016702|GO:0046872
Gso8g1570 1738 ProSiteProfiles PLAT domain profile. 914 1042 IPR001024 GO:0005515
Gso8g1570 1738 Pfam PLAT/LH2 domain 69 166 IPR001024 GO:0005515
Gso8g1570 1738 Pfam PLAT/LH2 domain 946 1042 IPR001024 GO:0005515
Gso8g1570 1738 ProSiteProfiles PLAT domain profile. 39 167 IPR001024 GO:0005515
Gso8g1570 1738 Gene3D - 271 360 IPR027433 -
Gso8g1570 1738 Gene3D - 1148 1236 IPR027433 -
Gso8g1570 1738 MobiDBLite consensus disorder prediction 223 257 - -
Gso8g1570 1738 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 8 863 - -
Gso8g1570 1738 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 872 1738 - -
Gso8g1570 1738 SMART LH2_4 14 168 IPR001024 GO:0005515
Gso8g1570 1738 SMART LH2_4 880 1044 IPR001024 GO:0005515
Gso8g1570 1738 SUPERFAMILY Lipoxigenase 1048 1738 IPR036226 -
Gso8g1570 1738 Gene3D PLAT/LH2 domain 5 171 - -
Gso8g1570 1738 ProSitePatterns Lipoxygenases iron-binding region signature 2. 1421 1431 IPR020834 GO:0016702|GO:0046872
Gso8g1570 1738 Gene3D - 172 270 - -
Gso8g1570 1738 Gene3D - 1048 1147 - -
Gso8g1570 1738 CDD PLAT_LH2 880 1044 IPR042057 -
Gso8g1570 1738 CDD PLAT_LH2 15 168 IPR042057 -
Gso8g1570 1738 PRINTS Lipoxygenase signature 500 517 IPR013819 GO:0016702|GO:0046872
Gso8g1570 1738 PRINTS Lipoxygenase signature 518 535 IPR013819 GO:0016702|GO:0046872
Gso8g1570 1738 PRINTS Lipoxygenase signature 538 558 IPR013819 GO:0016702|GO:0046872
Gso8g1570 1738 PRINTS Plant lipoxygenase signature 1012 1030 IPR001246 GO:0016491
Gso8g1570 1738 PRINTS Plant lipoxygenase signature 1039 1060 IPR001246 GO:0016491
Gso8g1570 1738 PRINTS Plant lipoxygenase signature 1078 1094 IPR001246 GO:0016491
Gso8g1570 1738 PRINTS Plant lipoxygenase signature 1111 1130 IPR001246 GO:0016491
Gso8g1570 1738 PRINTS Plant lipoxygenase signature 1178 1199 IPR001246 GO:0016491
Gso8g1570 1738 PRINTS Plant lipoxygenase signature 1223 1239 IPR001246 GO:0016491
Gso8g1570 1738 PRINTS Plant lipoxygenase signature 1262 1281 IPR001246 GO:0016491
Gso8g1570 1738 PRINTS Plant lipoxygenase signature 1329 1353 IPR001246 GO:0016491
Gso8g1570 1738 PRINTS Plant lipoxygenase signature 1651 1665 IPR001246 GO:0016491
Gso8g1570 1738 ProSitePatterns Lipoxygenases iron-binding region signature 2. 545 555 IPR020834 GO:0016702|GO:0046872
Gso8g1570 1738 Gene3D - 1237 1371 - -
Gso8g1570 1738 Gene3D - 361 495 - -
Gso8g1570 1738 Gene3D - 496 862 - -
Gso8g1570 1738 Gene3D - 1372 1737 - -
Gso8g1570 1738 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 880 1047 IPR036392 GO:0005515
Gso8g1570 1738 SUPERFAMILY Lipoxigenase 173 863 IPR036226 -
Gso8g1570 1738 ProSitePatterns Lipoxygenases iron-binding region signature 1. 1394 1408 IPR020833 GO:0016702|GO:0046872
Gso8g1570 1738 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 14 171 IPR036392 GO:0005515
Gso8g1570 1738 Gene3D PLAT/LH2 domain 872 1047 - -
Gso8g1570 1738 ProSitePatterns Lipoxygenases iron-binding region signature 1. 518 532 IPR020833 GO:0016702|GO:0046872
Gso8g1570 1738 PANTHER LIPOXYGENASE 8 863 IPR000907 GO:0016702|GO:0046872
Gso8g1570 1738 PANTHER LIPOXYGENASE 872 1738 IPR000907 GO:0016702|GO:0046872
Gso8g1570 1738 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 170 863 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g1570 Gso-Chr8 15285068 15304313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g1570 11 863 Acyl Lipid Metabolism Gene Families AT1G55020 57.044 0.0 1006
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g1570 K15718 - gmx:100815477 1749.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0056 7 492157 497930 Gso8g1570 8 15285068 15304313 GST
Gso15g0234 15 2138494 2142470 Gso8g1570 8 15285068 15304313 PCT