Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0861 ATGCCTAGTTTTGTGGCTGAAAAGAAGATATTTGTAGAGCCAAATATGTGTTTTACCAATTTGGCCAACCATGATAGACCAACTCTTACAAAAAACAATCATTATGTGAGGTCTGAGGCTCTGGATGATGATGATGATGGTACTAGCCCCATCCTACCTGGGCTGCCTGATGATGTTTCAAAACACTGCCTTGCACTCGTGCCTCGTTCGAACTTCCCAGCCATGGGTGGTGTCTGCAAGAGATGGAGGGGCTTTATTCGAAGCAAAGAATTTATAACCGTGCGAAAATTGGCTGGGATGCATGAGGAATGGCTCTATATCTTGACAGCAGGCAGTGAAGGAAAAGGGAGCCATTGGGAGGTCATGGATTGTCTTGGGCATAATCGCCGATCTCTTCCACCAATGCCTGGTCCAGCAAAGGCTGGCTTTGGGGTAGTAGTTCTTAATGGAAAGCTCCTTGTTATGGCTGGTTATTCATCCATTGATGGGACTGCTTCTGTCTCAGCAGAGGTTTACCAATATGATTCTTGCCTCAACAGCTGGAGCAGATTGTCAAGCATGAACGTGGCTCGGTATGACTTTGCTTGTGCTGAAGTCGACGGCTTGGTTTATGCCGTTGGAGGCTATGGCGCAACCGGTGACAGTCTCTCAAGTGCAGAGGTGTATGATCTGGATACCGACAAGTGGACGCCAATAGAGAGTCTCCGTCGCCCGAGATGGGGTTGCTTTGCCTGTGGATTCGAGGGGAAGCTCTATGTCATGGGTGGAAGGTCAAGCTTCACAATTGGAAACTCCAAGTTTGTTGATGTCTACAACCCTGAGAAGCACGGGTGGTGTGAGATGAAAAATGGGTGTGTCATGGTCACTGCTTATGCAGTGCTGGAAAAGAAGTTGTTCTGCATGGAGTGGAAGAACCAGCGGAAGTTGGCAATATTCAATCCAGAGGACAATTCATGGAAAATGGTACCAGTCCCTTTGACAGGGAGTTCAAGCATTGGTTTTCGGTTCGGGATATTGGATGGTAAGTTGTTGCTTTTCTCACTGGAGGAAGAGCCTTCATATAAGACTTTGTTGTATGATCCAAATGCAGCACCAGGATCTGAGTGGCACACCTCTGATATAAGACCATCTGGTTTGTGTTTATGCAGTGTAACTATTAAGGCCTGA 1167 0.4696 MPSFVAEKKIFVEPNMCFTNLANHDRPTLTKNNHYVRSEALDDDDDGTSPILPGLPDDVSKHCLALVPRSNFPAMGGVCKRWRGFIRSKEFITVRKLAGMHEEWLYILTAGSEGKGSHWEVMDCLGHNRRSLPPMPGPAKAGFGVVVLNGKLLVMAGYSSIDGTASVSAEVYQYDSCLNSWSRLSSMNVARYDFACAEVDGLVYAVGGYGATGDSLSSAEVYDLDTDKWTPIESLRRPRWGCFACGFEGKLYVMGGRSSFTIGNSKFVDVYNPEKHGWCEMKNGCVMVTAYAVLEKKLFCMEWKNQRKLAIFNPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYKTLLYDPNAAPGSEWHTSDIRPSGLCLCSVTIKA* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0861 388 Pfam Kelch motif 239 283 IPR011498 GO:0005515
Gso8g0861 388 Pfam Kelch motif 141 188 IPR006652 GO:0005515
Gso8g0861 388 Pfam Kelch motif 190 235 IPR006652 GO:0005515
Gso8g0861 388 SUPERFAMILY Kelch motif 102 349 IPR015915 GO:0005515
Gso8g0861 388 PANTHER OS02G0202900 PROTEIN 1 388 IPR045887 -
Gso8g0861 388 SMART fbox_2 55 95 IPR001810 GO:0005515
Gso8g0861 388 SMART kelc_smart 151 201 IPR006652 GO:0005515
Gso8g0861 388 SMART kelc_smart 202 249 IPR006652 GO:0005515
Gso8g0861 388 Pfam F-box domain 54 91 IPR001810 GO:0005515
Gso8g0861 388 SUPERFAMILY F-box domain 49 92 IPR036047 GO:0005515
Gso8g0861 388 Gene3D - 87 386 IPR015915 GO:0005515
Gso8g0861 388 PANTHER KELCH REPEAT F-BOX PROTEIN 1 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0861 Gso-Chr8 7992832 7996755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0861 55 233 Miscellaneous Gene Families AT4G33900 29.016 3.75e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0861 - - gmx:100815474 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0068 18 583927 586960 Gso8g0861 8 7992832 7996755 PCT
Gso13g1553 13 30908283 30911504 Gso8g0861 8 7992832 7996755 PCT
Gso8g0861 8 7992832 7996755 Gso18g0068 18 583927 586960 PCT
Gso8g0861 8 7992832 7996755 Gso13g1553 13 30908283 30911504 PCT