Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0532 ATGGCGGTGGAGTACACATGCTGCTCAACGGCCTTCTTCGTTCACATACTGGTCATCGTGCTGCTCGTGCTTTTCGCGGGCCTCATGTCGGGCCTCACCTTGGGCCTCATGTCGCTCAGCCTCGTTGATCTTGAAGTTCTTGCTAAGTCTGGTACTCCTCAGGATCGTAAACACGCTGAGAAGATATTACCAGTTGTCAAAAACCAACATTTATTGCTATGTACTCTGCTAATTTGCAATGCTGCAGCCATGGAGACACTTCCTATTTTTCTTGATGGCCTTGTTACTGCATGGGGCGCTATCCTAATTTCTGTGACATTAATTCTTTTGTTTGGTGAGATTATACCCCAATCAGTTTGTTCTCGGTATGGTTTGGCTATTGGTGCATCAGTGGCTCCCTTTGTCCGTGTGCTTGTATGCATATGTTTTCCAGTTGCCTATCCAATTAGTAAGTTATTAGATTTTTTGCTGGGCCATCGACATGAAGCCCTATTCCGTAGAGCTGAGTTGAAAACACTCGTAAATTTGCATGGTAATGAGGCTGGAAAAGGGGGGGAACTGACACATGATGAAACAACGATCATTGCCGGGGCACTTGAACTCAGTGAGAAGACGGCGAGTGATGCCATGACTCCTATATCTGAAACATTTACTGTTGATATTAATTCAAAGCTTGATAGGGAACTGATGAATGAGATATTGGAGAAAGGGCACAGCAGAGTCCCAGTCTATTATGAGCAGCCTACAAACATTATTGGACTTGTACTGGTCAAGAATTTATTGACAGTTCATCCAGAAGATGAAGCACCCATGAAGAGTGTAACCATACGCAGGATTCCAAGGGTTCCAGAAAGTATGCCACTTTATGACATTTTGAATGAGTTTCAGAAGGGCCATAGCCACATGGCAGTTGTTGTCAGACGGTGTGACAAGACTAACCAACAATCTTCCCAAAATAATGCAAATGACTCGGTGAGAGATGTTAAGGTGGATATTGATGGTGAAAAGCCTCCCAAAGAGAAAGCTTTGAAACCCAAGATGCCACTCCACAAGTGGAAAAGCTTTCCAAATACAAACAAGTCATCAAATAGGGGTTCTCGGAGCAGAAAATGGTCAAAAAATATGTACTCGGATATTTTGGAGATAGATGGAAGTCCCCTTCCAAAGCTCCCTGAAGAAGAAGAAGCCGTTGGAATTATTACCATGGAAGATGTCATTGAAGAGCTTTTACAGGAGGAGATCTTTGATGAGACAGATCATCATTTTGAAGACTCATAA 1278 0.4327 MAVEYTCCSTAFFVHILVIVLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRKHAEKILPVVKNQHLLLCTLLICNAAAMETLPIFLDGLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVAPFVRVLVCICFPVAYPISKLLDFLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPISETFTVDINSKLDRELMNEILEKGHSRVPVYYEQPTNIIGLVLVKNLLTVHPEDEAPMKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVVVRRCDKTNQQSSQNNANDSVRDVKVDIDGEKPPKEKALKPKMPLHKWKSFPNTNKSSNRGSRSRKWSKNMYSDILEIDGSPLPKLPEEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0532 425 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Gso8g0532 425 Gene3D - 380 417 IPR046342 -
Gso8g0532 425 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 425 IPR045095 GO:0010960
Gso8g0532 425 SUPERFAMILY CBS-domain pair 194 411 IPR046342 -
Gso8g0532 425 ProSiteProfiles CBS domain profile. 210 271 IPR000644 -
Gso8g0532 425 Gene3D - 191 325 IPR046342 -
Gso8g0532 425 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 425 - -
Gso8g0532 425 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Gso8g0532 425 MobiDBLite consensus disorder prediction 332 370 - -
Gso8g0532 425 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Gso8g0532 425 MobiDBLite consensus disorder prediction 354 370 - -
Gso8g0532 425 MobiDBLite consensus disorder prediction 332 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0532 Gso-Chr8 4904298 4909325 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0532 K16302 - gmx:100808328 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1578 7 37551221 37556480 Gso8g0532 8 4904298 4909325 GST
Gso8g0532 8 4904298 4909325 Gso15g0533 15 4776962 4782514 PCT
Gso8g0532 8 4904298 4909325 Gso11g2774 11 43532624 43536818 PCT
Gso15g0533 15 4776962 4782514 Gso8g0532 8 4904298 4909325 PCT
Gso11g2774 11 43532624 43536818 Gso8g0532 8 4904298 4909325 PCT