Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0533 ATGGCGGTGGAGTACCAGTGTTGTGAAACTCAGTTTTTCATACGCTTATTGATAATTTTGCTGCTTGTGTTGTTTGCTGGATTGATGTCAGGGCTCACTTTAGGACTCATGTCCTTGAGTCTTGTTGATCTTGAGGTTCTCGCTAAGTCTGGCACCCCTCAGGGTCGCAAACATGCTGCGAAGATATTGCCTGTTGTCAGAAATCAACATTTGTTGCTTTGCACCCTTCTAATTTGTAATGCTGCAGCCATGGAGGCACTTCCTATCTTTCTTGATGGTCTTGTTGTGGCGTGGGGTGCTGTCTTGATTTCAGTAACATTAATTCTTCTGTTTGGTGAGATTATACCACAATCAATTTGTTCTCGGTATGGTTTAGCAATTGGTGCAACAGTGGCTCCATTTGTTCGGGTTCTTGTATGGATATGCTTTCCTGTTGCTTATCCAATTAGCAAGTTGTTGGATTATTTGCTGGGGCATCGACATGAAGCCCTTTTCCGCAGAGCTGAGTTGAAAACACTTGTAAATCTGCATGGCAACGAGGCTGGAAAAGGTGGAGAACTGACACATGATGAAACCACAATCATTGCTGGAGCGCTTGAACTTTCTGAGAAGACAGCCAGTGATGCCATGACCCCCATAACTGAAATATTTTCTGTTGATATTAATGCAAAGCTTGATAGGGATTTGTTTAGTCTAATATTGGAGAAAGGGCATAGCAGAGTTCCTGTCTATTACGAGCAGCCTACAAATATTTTTGGACTTGTCCTGGCAAAGAATTTATTGACAATTGACCCAGAAGAAGAAATACCCGTGAAAAGTGTGACCATCCGCAGGATTCCAAGGGTTCCAGAAACGTTGCCACTTTATGATATTTTGAATGAGTTCCAGAAGGGCCATAGCCACATGGCTGTTGTTGTCAGACATTTTGAGAAGACAAGGCAACAGTCTTCCAACAATAATGCCGATGTGAGAGATGTAAAGGTAGATATTGATGGGGAGAAGACTCCCCAAGGGAATATTTTGAAGACCAAGAGGTCACTCCAAAAGTGGAAAAGCTTTCCAAACTCAAATAATTCGAATAGGGGTGGTTCCCGGAGCAGGAAATGGTCAAAAAATATTTACTCGTATATTCTAGAAATAGATGGAAATTCACTTCCAAGTTTGCCCGAAAAAGAAGAAGCTGTTGGAATAATTACAATGAAAGATGTCATTGAAGAGCTTTTACAGGAGGAGATCTTTGATGAGACGGATCATCATTTTGAAGACTCATGA 1272 0.4167 MAVEYQCCETQFFIRLLIILLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQGRKHAAKILPVVRNQHLLLCTLLICNAAAMEALPIFLDGLVVAWGAVLISVTLILLFGEIIPQSICSRYGLAIGATVAPFVRVLVWICFPVAYPISKLLDYLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPITEIFSVDINAKLDRDLFSLILEKGHSRVPVYYEQPTNIFGLVLAKNLLTIDPEEEIPVKSVTIRRIPRVPETLPLYDILNEFQKGHSHMAVVVRHFEKTRQQSSNNNADVRDVKVDIDGEKTPQGNILKTKRSLQKWKSFPNSNNSNRGGSRSRKWSKNIYSYILEIDGNSLPSLPEKEEAVGIITMKDVIEELLQEEIFDETDHHFEDS* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0533 423 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Gso15g0533 423 Gene3D - 189 324 IPR046342 -
Gso15g0533 423 ProSiteProfiles CBS domain profile. 210 271 IPR000644 -
Gso15g0533 423 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Gso15g0533 423 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 423 IPR045095 GO:0010960
Gso15g0533 423 SUPERFAMILY CBS-domain pair 194 409 IPR046342 -
Gso15g0533 423 CDD CBS_pair_CorC_HlyC_assoc 205 312 IPR044751 -
Gso15g0533 423 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0533 Gso-Chr15 4776962 4782514 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0533 K16302 - gmx:100789945 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0533 15 4776962 4782514 Gso15g0533 15 4776962 4782514 ECH
Gso15g0533 15 4776962 4782514 Gso11g2774 11 43532624 43536818 GST
Gso7g1578 7 37551221 37556480 Gso15g0533 15 4776962 4782514 PCT
Gso8g0532 8 4904298 4909325 Gso15g0533 15 4776962 4782514 PCT
Gso15g0533 15 4776962 4782514 Gso7g1578 7 37551221 37556480 PCT
Gso15g0533 15 4776962 4782514 Gso8g0532 8 4904298 4909325 PCT